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DolZOral124_scaffold_4

Search features with annotation key words

Displaying items 121-150 of 224 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4_120
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122273..123544)
-----------------
DNA (1272bp)
protein (424aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1353537 speci
transcription termination factor Rho n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B34C96 rbh
rho; transcription termination factor Rho
DolZOral124_scaffold_4_121
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124028..124870
-----------------
DNA (843bp)
protein (281aa)
aroE; shikimate5-dehydrogenase AroE (EC:1.1.1.25)
Shikimate 5-dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD62_9RHOB
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EAQ14091.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacte
DolZOral124_scaffold_4_122
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124867..125457
-----------------
DNA (591bp)
protein (197aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=314271 species="Bacteria; Pr
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD61_9RHOB
DolZOral124_scaffold_4_123
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125459..126205
-----------------
DNA (747bp)
protein (249aa)
DNA polymerase III subunit epsilon n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JH87_9RHOB
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EKE74538.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celer
DNA polymerase III subunit epsilon
DolZOral124_scaffold_4_124
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126195..126683)
-----------------
DNA (489bp)
protein (163aa)
Protein-export protein SecB n=1 Tax=Sagittula stellata E-37 RepID=A3K2Y5_9RHOB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula st
preprotein translocase subunit SecB
DolZOral124_scaffold_4_125
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126728..127201)
-----------------
DNA (474bp)
protein (158aa)
UPI0003D6AD64 related cluster n=1 Tax=unknown RepID=UPI0003D6AD64
exlusion protein FxsA
Exlusion protein FxsA {ECO:0000313|EMBL:AHD02637.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohal
DolZOral124_scaffold_4_126
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127295..127951
-----------------
DNA (657bp)
protein (219aa)
Transporter, Tim44 family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXV0_9RHOB
Transporter, Tim44 family protein {ECO:0000313|EMBL:EAQ02984.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicol
transporter, Tim44 family
DolZOral124_scaffold_4_127
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127948..128985
-----------------
DNA (1038bp)
protein (346aa)
Membrane-bound lytic murein transglycosylase (EC:3.2.1.-)
Uncharacterized protein {ECO:0000313|EMBL:AHD11303.1}; EC=3.2.1.- {ECO:0000313|EMBL:AHD11303.1};; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
UPI0003D6A514 related cluster n=1 Tax=unknown RepID=UPI0003D6A514
DolZOral124_scaffold_4_128
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128986..129567
-----------------
DNA (582bp)
protein (194aa)
Putative Smr n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD59_9RHOB
Putative Smr {ECO:0000313|EMBL:EAQ14088.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilu
Smr protein/MutS2
DolZOral124_scaffold_4_129
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129564..130664)
-----------------
DNA (1101bp)
protein (367aa)
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein PaTRP_00655 id=2938026 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
DolZOral124_scaffold_4_130
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130712..132019)
-----------------
DNA (1308bp)
protein (436aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD45_9RHOB
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=314271 species="Bacteria; Proteobac
hslU; ATP-dependent protease ATP-binding subunit HslU
DolZOral124_scaffold_4_131
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132016..132573)
-----------------
DNA (558bp)
protein (186aa)
hslV; ATP-dependent protease hslV (EC:3.4.25.-)
ATP-dependent protease subunit HslV {ECO:0000255|HAMAP-Rule:MF_00248}; EC=3.4.25.2 {ECO:0000255|HAMAP-Rule:MF_00248};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
ATP-dependent protease subunit HslV n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=HSLV_RUEPO
DolZOral124_scaffold_4_132
Roseivivax halodurans, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132634..133629)
-----------------
DNA (996bp)
protein (332aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
hemH; ferrochelatase HemH (EC:4.99.1.1)
ferrochelatase n=1 Tax=Ruegeria conchae RepID=UPI00023799FD
DolZOral124_scaffold_4_133
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133808..134539
-----------------
DNA (732bp)
protein (244aa)
UPI0003D6CD4A related cluster n=1 Tax=unknown RepID=UPI0003D6CD4A
competence protein ComF
Competence protein ComF {ECO:0000313|EMBL:KAJ03873.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter med
DolZOral124_scaffold_4_134
Pseudomonas poae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134570..134824
-----------------
DNA (255bp)
protein (85aa)
Glutaredoxin n=2 Tax=Pseudomonas fluorescens group RepID=M4KA75_9PSED
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AGE28572.1}; TaxID=1282356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas poae RE*1-1-14.;
DolZOral124_scaffold_4_135
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134963..135406
-----------------
DNA (444bp)
protein (148aa)
Transcriptional regulator, MarR family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD53_9RHOB
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AJE44968.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Ce
DolZOral124_scaffold_4_136
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135403..136182
-----------------
DNA (780bp)
protein (260aa)
Acetyltransferase (Gnat) family protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8C9_9RHOB
Acetyltransferase (Gnat) family protein, putative {ECO:0000313|EMBL:EEA92515.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;"
acetyltransferase
DolZOral124_scaffold_4_137
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136160..136909)
-----------------
DNA (750bp)
protein (250aa)
bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DED9_9RHOB
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
DolZOral124_scaffold_4_138
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136976..137950
-----------------
DNA (975bp)
protein (325aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
pip; proline iminopeptidase (EC:3.4.11.5)
Proline iminopeptidase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD43_9RHOB
DolZOral124_scaffold_4_139
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137984..138655
-----------------
DNA (672bp)
protein (224aa)
Ribosome maturation factor RimP n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NTF2_9RHOB
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
hypothetical protein
DolZOral124_scaffold_4_140
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138657..140408
-----------------
DNA (1752bp)
protein (584aa)
NusA antitermination factor n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28WF5_JANSC rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rosei
nusA; transcription elongation factor NusA rbh
DolZOral124_scaffold_4_141
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140430..141068
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQ55_DINSH
LSU ribosomal protein L7AE {ECO:0000313|EMBL:BAQ71127.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfid
hypothetical protein
DolZOral124_scaffold_4_142
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141058..143535
-----------------
DNA (2478bp)
protein (826aa)
Translation initiation factor IF-2 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD35_9RHOB
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
infB; translation initiation factor IF-2
DolZOral124_scaffold_4_143
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143572..143886)
-----------------
DNA (315bp)
protein (105aa)
mutT; mutator mutT protein (EC:3.6.1.-)
Mutator mutT protein {ECO:0000313|EMBL:AAV93391.1}; EC=3.6.1.- {ECO:0000313|EMBL:AAV93391.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; R
Mutator mutT protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LWL5_RUEPO
DolZOral124_scaffold_4_144
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143974..145275)
-----------------
DNA (1302bp)
protein (434aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CT55_9RHOB rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" s
DolZOral124_scaffold_4_145
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145280..146146)
-----------------
DNA (867bp)
protein (289aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
PPIC-type PPIASE domain protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD32_9RHOB rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
DolZOral124_scaffold_4_146
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146323..149016
-----------------
DNA (2694bp)
protein (898aa)
Protein translocase subunit SecA n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD31_9RHOB
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
secA; preprotein translocase, SecA subunit
DolZOral124_scaffold_4_147
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149191..150258
-----------------
DNA (1068bp)
protein (356aa)
Possible TolA protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD30_9RHOB
Possible TolA protein {ECO:0000313|EMBL:EAQ14059.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter al
hypothetical protein
DolZOral124_scaffold_4_148
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150279..151838
-----------------
DNA (1560bp)
protein (520aa)
OmpA domain protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD29_9RHOB rbh
OmpA domain protein {ECO:0000313|EMBL:EAQ14058.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alka
hypothetical protein
DolZOral124_scaffold_4_149
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151839..152483)
-----------------
DNA (645bp)
protein (215aa)
Uncharacterized protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0FL79_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC10323.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
radC; DNA repair protein RadC
Displaying items 121-150 of 224 in total

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