ggKbase home page

DolZOral124_scaffold_298

Search features with annotation key words

Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_298_30
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39293..41422)
-----------------
DNA (2130bp)
protein (710aa)
cphA; cyanophycin synthetase; K03802 cyanophycin synthetase [EC:6.-.-.-] Tax=GWF2_Bacteroidetes_35_48_curated
glutathione synthase (EC:6.3.2.3)
Cyanophycin synthetase id=3625808 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
DolZOral124_scaffold_298_31
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41549..42385)
-----------------
DNA (837bp)
protein (279aa)
cyanophycinase; K13282 cyanophycinase [EC:3.4.15.6] Tax=GWF2_Bacteroidetes_35_48_curated
cyanophycinase (EC:3.4.15.6)
Cyanophycinase id=4344131 bin=GWF2_Bacteroidetes_35_48 species=Chromohalobacter salexigens genus=Chromohalobacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
DolZOral124_scaffold_298_32
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42725..43432)
-----------------
DNA (708bp)
protein (236aa)
response regulator of the LytR/AlgR family Tax=GWA2_Bacteroidetes_31_9_curated
two component transcriptional regulator, lyttr family protein id=3454826 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
response regulator of the LytR/AlgR family
DolZOral124_scaffold_298_33
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43653..44402)
-----------------
DNA (750bp)
protein (250aa)
Hpt sensor hybrid histidine kinase id=2039708 bin=GWE2_Bacteroidetes_42_39 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Hpt sensor hybrid histidine kinase Tax=GWE2_Bacteroidetes_42_39_curated
Hpt sensor hybrid histidine kinase
DolZOral124_scaffold_298_34

Not on your lists


44886..45092
-----------------
DNA (207bp)
protein (69aa)
50S ribosomal protein L28 n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BD2D
Marine sediment metagenome DNA, contig: S12H4_C03553 {ECO:0000313|EMBL:GAI68417.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L28
DolZOral124_scaffold_298_35
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


45112..45300
-----------------
DNA (189bp)
protein (63aa)
50S ribosomal protein L33 n=2 Tax=environmental samples RepID=R5PCK5_9PORP
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" sourc
LSU ribosomal protein L33p
DolZOral124_scaffold_298_36
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45309..45464
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IJN6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY37122.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tann
hypothetical protein
DolZOral124_scaffold_298_37
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45729..46679
-----------------
DNA (951bp)
protein (317aa)
Signal recognition particle receptor FtsY n=2 Tax=Parabacteroides RepID=N2AQZ1_9PORP
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bactero
recognition particle-docking protein FtsY
DolZOral124_scaffold_298_38
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46782..48092
-----------------
DNA (1311bp)
protein (437aa)
ribosomal protein S12 methylthiotransferase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B2354
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
ribosomal protein S12 methylthiotransferase
DolZOral124_scaffold_298_39
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48384..49844)
-----------------
DNA (1461bp)
protein (487aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3); K01270 dipeptidase D [EC:3.4.13.-] Tax=GWD2_Bacteroidetes_33_33_curated
Aminoacyl-histidine dipeptidase id=2043311 bin=GWD2_Bacteroidetes_33_33 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
aminoacyl-histidine dipeptidase
DolZOral124_scaffold_298_40
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50027..51589)
-----------------
DNA (1563bp)
protein (521aa)
phosphodiesterase id=3854319 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=GWF2_Bacteroidetes_38_335_curated
ribonuclease
DolZOral124_scaffold_298_41
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52228..52539)
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
hypothetical protein AtheD1_16730 id=3692184 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
DolZOral124_scaffold_298_42
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52578..52868)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
Putative uncharacterized protein id=3885508 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
DolZOral124_scaffold_298_43
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53289..54746
-----------------
DNA (1458bp)
protein (486aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H857_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92252.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;
oxalate:formate antiporter
DolZOral124_scaffold_298_44
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(54873..57542)
-----------------
DNA (2670bp)
protein (890aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000368BB3A rbh
Uncharacterized protein {ECO:0000313|EMBL:EJF08655.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
glycogen debranching protein
DolZOral124_scaffold_298_45
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57647..58894)
-----------------
DNA (1248bp)
protein (416aa)
NAD(FAD)-utilizing dehydrogenases id=4366288 bin=GWF2_Bacteroidetes_41_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
NAD(FAD)-utilizing dehydrogenases; K07007 Tax=GWF2_Bacteroidetes_41_31_curated
NAD(FAD)-utilizing dehydrogenases
DolZOral124_scaffold_298_46
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(58913..60316)
-----------------
DNA (1404bp)
protein (468aa)
Transporter n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z8I3_MELRP
SNF family Na+-dependent transporter Tax=RBG_13_Ignavibacteria_36_8_curated
SNF family Na+-dependent transporter
DolZOral124_scaffold_298_47
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60899..61501
-----------------
DNA (603bp)
protein (201aa)
Putative uncharacterized protein id=3691861 bin=GWF2_Bacteroidetes_33_16 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
DolZOral124_scaffold_298_48
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

61502..61792
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5LP56_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY80970.1}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
hypothetical protein
DolZOral124_scaffold_298_49
unknown

Not on your lists

62053..62274
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

DolZOral124_scaffold_298_50
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

62502..62948
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000287D6F8
Uncharacterized protein {ECO:0000313|EMBL:AHM61360.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
DolZOral124_scaffold_298_51
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

63330..64760
-----------------
DNA (1431bp)
protein (477aa)
Sodium:dicarboxylate symporter n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZMV9_9BACT rbh
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EAY28140.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 231
sodium:dicarboxylate symporter
DolZOral124_scaffold_298_52
unknown

Not on your lists

comp(64781..65122)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

DolZOral124_scaffold_298_53
unknown

Not on your lists

comp(65197..66453)
-----------------
DNA (1257bp)
protein (419aa)

This feature has no annotations

DolZOral124_scaffold_298_54
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(66641..67660)
-----------------
DNA (1020bp)
protein (340aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=GWE2_Bacteroidetes_32_14_curated
UGMP family protein id=4341541 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
DolZOral124_scaffold_298_55
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67707..68921)
-----------------
DNA (1215bp)
protein (405aa)
Putative carbamoyltransferase YgeW id=1794339 bin=GWD2_Bacteroidetes_40_43 species=Veillonella sp. oral taxon 780 genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
aspartate/ornithine carbamoyltransferase family protein Tax=GWE2_Bacteroidetes_40_63_curated
aspartate/ornithine carbamoyltransferase
DolZOral124_scaffold_298_56
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68952..70148)
-----------------
DNA (1197bp)
protein (399aa)
Putative selenium metabolism hydrolase id=4107555 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
selenium metabolism hydrolase Tax=GWA2_Bacteroidetes_32_17_curated
selenium metabolism hydrolase
DolZOral124_scaffold_298_57
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70334..70828)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1MN42_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB57574.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum AT
ATP-binding protein
DolZOral124_scaffold_298_58
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71072..71467)
-----------------
DNA (396bp)
protein (132aa)
Putative uncharacterized protein id=2017121 bin=GWD2_Bacteroidetes_33_33 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
OsmC family protein
DolZOral124_scaffold_298_59
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(71710..72603)
-----------------
DNA (894bp)
protein (298aa)
Adenylate/guanylate cyclase id=2732442 bin=GWC1_Spirochaetes_27_15 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
adenylate/guanylate cyclase Tax=GWD1_Spirochaetes_27_9_curated
TM2 domain-containing protein
Displaying items 31-60 of 67 in total

View Taxonomy