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DolZOral124_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_379_1
unknown

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comp(1..171)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

DolZOral124_scaffold_379_2
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(284..2584)
-----------------
DNA (2301bp)
protein (767aa)
Pyruvate formate-lyase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K8C1_CLOPA rbh
pyruvate formate-lyase
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_379_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2613..3353)
-----------------
DNA (741bp)
protein (247aa)
Transcriptional regulator, DeoR family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BDR3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95905.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
DolZOral124_scaffold_379_4
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3442..4401)
-----------------
DNA (960bp)
protein (320aa)
Inner-membrane translocator id=2867893 bin=GWA1_Treponema_62_8 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
inner-membrane translocator
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_379_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4412..5386)
-----------------
DNA (975bp)
protein (325aa)
Inner-membrane translocator id=2867889 bin=GWA1_Treponema_62_8 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
inner-membrane translocator rbh
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_379_6
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5391..6887)
-----------------
DNA (1497bp)
protein (499aa)
Monosaccharide-transporting ATPase id=2867887 bin=GWA1_Treponema_62_8 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
monosaccharide-transporting ATPase
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_379_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6972..8009)
-----------------
DNA (1038bp)
protein (346aa)
Bifunctional carbohydrate binding and transport protein id=2867885 bin=GWA1_Treponema_62_8 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
bifunctional carbohydrate binding and transport protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_379_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8465..10876)
-----------------
DNA (2412bp)
protein (804aa)
Pyruvate formate-lyase {ECO:0000313|EMBL:AGF58492.1}; EC=2.3.1.54 {ECO:0000313|EMBL:AGF58492.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
pyruvate formate-lyase (EC:2.3.1.54)
Pyruvate formate-lyase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N4W4_9CLOT
DolZOral124_scaffold_379_9
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(10956..11573)
-----------------
DNA (618bp)
protein (206aa)
Uncharacterized protein n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2RCF4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERK66526.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9
hypothetical protein
DolZOral124_scaffold_379_10
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11576..12517)
-----------------
DNA (942bp)
protein (314aa)
Tetratricopeptide repeat protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERU0_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEG38032.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3
hypothetical protein
DolZOral124_scaffold_379_11
Fusobacterium hwasookii, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(12517..13359)
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum ChDC F128 RepID=J8V4S5_FUSNU
Uncharacterized protein {ECO:0000313|EMBL:EJU07787.1}; TaxID=1216362 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium hwasookii ChDC F128.;"
hypothetical protein
DolZOral124_scaffold_379_trna_1
unknown

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13533..13604
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_379_12
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14147..14776)
-----------------
DNA (630bp)
protein (210aa)
RNA polymerase sigma70 factor n=1 Tax=Ureibacillus thermosphaericus RepID=UPI00037BE5E4
sigH; RNA polymerase factor sigma-70
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_379_13
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

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comp(14809..15543)
-----------------
DNA (735bp)
protein (245aa)
putative tRNA/rRNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=GWD2_Clostridiales_32_19_curated
RNA methyltransferase, TrmH family, group 3 id=2138586 bin=GWD2_Clostridiales_32_19 species=unknown genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
RNA methyltransferase, TrmH family, group 3
DolZOral124_scaffold_379_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15530..15931)
-----------------
DNA (402bp)
protein (134aa)
Mini-ribonuclease 3 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZPG8_9CLOT
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_379_15
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15931..17313)
-----------------
DNA (1383bp)
protein (461aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PM98_9FIRM
cysteinyl-tRNA synthetase
DolZOral124_scaffold_379_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17315..18451)
-----------------
DNA (1137bp)
protein (379aa)
Putative uncharacterized protein id=1971152 bin=GWD2_Clostridiales_32_59 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_379_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18568..19662
-----------------
DNA (1095bp)
protein (365aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C861_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDD74344.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
DolZOral124_scaffold_379_18

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comp(19651..20136)
-----------------
DNA (486bp)
protein (162aa)
dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] id=84490 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Dihydrofolate reductase (EC:1.5.1.3)
DolZOral124_scaffold_379_19
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20147..20977)
-----------------
DNA (831bp)
protein (277aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=7 Tax=Clostridium thermocellum RepID=A3DET0_CLOTH
DolZOral124_scaffold_379_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20989..21666)
-----------------
DNA (678bp)
protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
ung; uracil-DNA glycosylase Ung (EC:3.2.2.27)
Uracil-DNA glycosylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAR5_9CLOT rbh
DolZOral124_scaffold_379_21
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21671..23125)
-----------------
DNA (1455bp)
protein (485aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262880 species="Bacteria; F
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZMF5_9FIRM rbh
DolZOral124_scaffold_379_22
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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23257..24819
-----------------
DNA (1563bp)
protein (521aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LV72_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_379_23
unknown

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comp(24827..26596)
-----------------
DNA (1770bp)
protein (590aa)

This feature has no annotations

DolZOral124_scaffold_379_24
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26719..28959
-----------------
DNA (2241bp)
protein (747aa)
Secreted protein with C-terminal beta-propeller domain n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSV8_CLOCD
secreted protein
Secreted protein {ECO:0000313|EMBL:AHM56865.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
DolZOral124_scaffold_379_25
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29145..30056)
-----------------
DNA (912bp)
protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGU0_CLOSG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDU38371.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
DolZOral124_scaffold_379_26
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30068..30775)
-----------------
DNA (708bp)
protein (236aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Clostridium sp. CAG:567 RepID=R7M8M7_9CLOT
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:CDE97439.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
thiF domain-containing protein
DolZOral124_scaffold_379_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30996..33455)
-----------------
DNA (2460bp)
protein (820aa)
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJM2_9FIRM rbh
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_379_28
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(33679..33870)
-----------------
DNA (192bp)
protein (64aa)
Aspartate racemase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SLZ9_9FLAO
Aspartate racemase {ECO:0000313|EMBL:KFF06223.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenba
aspartate racemase
DolZOral124_scaffold_379_29
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(33824..34372)
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI00037CAF9C
Aspartate racemase {ECO:0000313|EMBL:EZH75548.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
aspartate racemase
Displaying items 1-30 of 60 in total

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