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DolZOral124_scaffold_429

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_429_31
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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comp(31033..31224)
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAM3_THEID
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH44295.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermod
DolZOral124_scaffold_429_32
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31783..32181)
-----------------
DNA (399bp)
protein (133aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z341_DESAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH85966.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivib
DolZOral124_scaffold_429_33
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32352..34499
-----------------
DNA (2148bp)
protein (716aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
UvrD/REP helicase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBK7_DESPD rbh
UvrD/REP helicase
DolZOral124_scaffold_429_34
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34538..35827
-----------------
DNA (1290bp)
protein (430aa)
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PEH2_DESSD
folylpolyglutamate synthase/dihydrofolate synthase Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
folylpolyglutamate synthase/dihydrofolate synthase
DolZOral124_scaffold_429_trna_1
unknown

Not on your lists

36242..36315
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_429_35
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36409..37653)
-----------------
DNA (1245bp)
protein (415aa)
MoeA domain protein domain I and II n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TXN2_DESML
MoeA domain protein domain I and II {ECO:0000313|EMBL:EPR41831.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source=
molybdopterin biosynthesis MoeA protein
DolZOral124_scaffold_429_36
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37670..39649)
-----------------
DNA (1980bp)
protein (660aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae
Histidine kinase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M609_GEODF rbh
histidine kinase
DolZOral124_scaffold_429_37
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39649..41031)
-----------------
DNA (1383bp)
protein (461aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000375FB09 rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KIH78120.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibac
sigma-54-dependent transcriptional response regulator
DolZOral124_scaffold_429_38
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41422..41988
-----------------
DNA (567bp)
protein (189aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWC2_Pelobacteraceae_58_13_curated
Formate dehydrogenase alpha subunit id=4638658 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
formate dehydrogenase
DolZOral124_scaffold_429_39
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42037..44430
-----------------
DNA (2394bp)
protein (798aa)
formate dehydrogenase
Formate dehydrogenase {ECO:0000313|EMBL:AJF07279.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter
Periplasmically oriented, membrane-bound formate dehydrogenase, major subunit, selenocysteine-containing id=4638659 bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
DolZOral124_scaffold_429_40
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44427..45284
-----------------
DNA (858bp)
protein (286aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4638660 bin=GWC2_Pelobacter_58_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit Tax=GWC2_Pelobacteraceae_58_13_curated
4Fe-4S ferredoxin
DolZOral124_scaffold_429_41
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45287..46522
-----------------
DNA (1236bp)
protein (412aa)
Periplasmically oriented, membrane-bound formate dehydrogenase, cytochrome b subunit id=4638661 bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
polysulfide reductase NrfD Tax=GWC2_Pelobacteraceae_58_13_curated
polusulphide reductase NrfD
DolZOral124_scaffold_429_42
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46598..48007
-----------------
DNA (1410bp)
protein (470aa)
Formate dehydrogenase family accessory protein FdhD id=4638662 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein Tax=GWC2_Pelobacteraceae_58_13_curated
formate dehydrogenase
DolZOral124_scaffold_429_43
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48313..48831
-----------------
DNA (519bp)
protein (173aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|SAAS:SAAS00049907}; EC=2.7.7.77 {ECO:0000256|SAAS:SAAS00049907};; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromo
Molybdopterin nucleotidyltransferase and molybdopterin-guanine dinucleotide biosynthesis protein MobB id=4638667 bin=GWC2_Pelobacter_58_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
mobA-1_mobB; molybdopterin nucleotidyltransferase and molybdopterin-guanine dinucleotide biosynthesis protein MobB
DolZOral124_scaffold_429_44
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48953..49609)
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XLJ7_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:EAQ49575.1}; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.;" source="Leeuwenhoekiella
DolZOral124_scaffold_429_trna_3
unknown

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comp(49715..49788)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_429_45
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49849..50247)
-----------------
DNA (399bp)
protein (133aa)
Regulatory protein MerR n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJV0_DESPD
regulatory protein MerR
Regulatory protein MerR {ECO:0000313|EMBL:ADW17591.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolZOral124_scaffold_429_46
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50375..50665)
-----------------
DNA (291bp)
protein (97aa)
Histone family protein DNA-binding protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU9_DESPD
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADW17590.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" sou
DolZOral124_scaffold_429_47
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(50662..53118)
-----------------
DNA (2457bp)
protein (819aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU8_DESPD rbh
DolZOral124_scaffold_429_48
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(53242..54252)
-----------------
DNA (1011bp)
protein (337aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU7_DESPD rbh
DolZOral124_scaffold_429_49
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(54256..54615)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L20 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU6_DESPD
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
DolZOral124_scaffold_429_50
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(54667..54864)
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L35 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU5_DESPD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
DolZOral124_scaffold_429_51
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54937..55314)
-----------------
DNA (378bp)
protein (126aa)
Translation initiation factor IF-3 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU4_DESPD
translation initiation factor 3 (bIF-3)
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source=
DolZOral124_scaffold_429_52
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55527..57452)
-----------------
DNA (1926bp)
protein (642aa)
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJU3_DESPD rbh
DolZOral124_scaffold_429_trna_2
unknown

Not on your lists

comp(57528..57599)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_429_53
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57719..58321)
-----------------
DNA (603bp)
protein (201aa)
Recombination protein RecR n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REJ0_DESPD
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae;
recombination protein RecR
DolZOral124_scaffold_429_54
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58331..58639)
-----------------
DNA (309bp)
protein (103aa)
Nucleoid-associated protein Despr_1917 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REI9_DESPD
hypothetical protein
Nucleoid-associated protein Despr_1917 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" sou
DolZOral124_scaffold_429_55
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58668..60557)
-----------------
DNA (1890bp)
protein (630aa)
DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REI8_DESPD rbh
DNA polymerase III subunits gamma and tau
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ADW18064.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" sou
DolZOral124_scaffold_429_56
Candidatus Desulfamplus magnetomortis, Candidatus Desulfamplus, Deltaproteobacteria, Proteobacteria, Bacteria

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61253..62533
-----------------
DNA (1281bp)
protein (427aa)
Uncharacterized protein n=1 Tax=Candidatus Desulfamplus magnetomortis RepID=L0R5I1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCO06785.1}; TaxID=1246637 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Desulfamplus.;" source="Candidatus Desulfamplus magnetomortis.;"
hypothetical protein
DolZOral124_scaffold_429_57
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62997..63968
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IPS7_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ12167.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
predicted transcriptional regulator
Displaying items 31-60 of 62 in total

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