ggKbase home page

DolZOral124_scaffold_534

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_534_31
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32307..32858)
-----------------
DNA (552bp)
protein (184aa)
Putative HD superfamily hydrolase n=1 Tax=Clostridium intestinale URNW RepID=U2N4R0_9CLOT
Putative HD superfamily hydrolase {ECO:0000313|EMBL:ERK30487.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale
putative HD superfamily hydrolase
DolZOral124_scaffold_534_32
Exiguobacterium pavilionensis, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33029..33538
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein n=1 Tax=Exiguobacterium pavilionensis RW-2 RepID=U1LYZ7_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ERG67939.1}; TaxID=1345023 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacteri
DolZOral124_scaffold_534_33
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33765..34358
-----------------
DNA (594bp)
protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XYG1_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ESL01768.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC
hypothetical protein
DolZOral124_scaffold_534_34
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

34358..36178
-----------------
DNA (1821bp)
protein (607aa)
ABC transporter related protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R796_SPISS
ABC transporter
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKB37645.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Meth
DolZOral124_scaffold_534_35
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

36179..37909
-----------------
DNA (1731bp)
protein (577aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XUH5_9FIRM
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:AKB37644.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" so
ABC transporter
DolZOral124_scaffold_534_36
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38498..39928
-----------------
DNA (1431bp)
protein (477aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BGZ7_PETMO
C4-dicarboxylate anaerobic carrier
Tax=BJP_IG2069_Clostridiales_48_15
DolZOral124_scaffold_534_37
Firmicutes bacterium CAG:345, Firmicutes, Bacteria

Not on your lists

40099..41457
-----------------
DNA (1359bp)
protein (453aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:345 RepID=R6Y3K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD23246.1}; TaxID=1263020 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:345.;"
Predicted ATPase (AAA+ superfamily)
DolZOral124_scaffold_534_38
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

41469..43634
-----------------
DNA (2166bp)
protein (722aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=102
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DSE0_9BACL
DolZOral124_scaffold_534_39
Streptococcus parauberis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

43729..45504
-----------------
DNA (1776bp)
protein (592aa)
EDD domain protein, DegV family n=1 Tax=Streptococcus parauberis NCFD 2020 RepID=F1Z2J8_9STRE
EDD domain protein, DegV family {ECO:0000313|EMBL:EGE55062.1}; TaxID=873447 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parauberis
DegV family protein with Dak phosphatase domain
DolZOral124_scaffold_534_40
Streptococcus parauberis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

45516..46277
-----------------
DNA (762bp)
protein (254aa)
Putative membrane protein n=1 Tax=Streptococcus parauberis NCFD 2020 RepID=F1Z2J7_9STRE
Putative membrane protein {ECO:0000313|EMBL:EGE53329.1}; TaxID=873447 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parauberis NCFD
hypothetical protein
DolZOral124_scaffold_534_41
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46329..47432)
-----------------
DNA (1104bp)
protein (368aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W595_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
DolZOral124_scaffold_534_trna_7
unknown

Not on your lists

comp(47632..47704)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_534_trna_6
unknown

Not on your lists

comp(47749..47821)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_534_trna_5
unknown

Not on your lists

comp(47869..47940)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_534_trna_4
unknown

Not on your lists

comp(47967..48039)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_534_trna_3
unknown

Not on your lists

comp(48048..48121)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_534_trna_2
unknown

Not on your lists

comp(48375..48445)
-----------------
DNA (71bp)
transferRNA
DolZOral124_scaffold_534_trna_1
unknown

Not on your lists

comp(48490..48563)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_534_42
Corynebacterium sp. ATCC 6931, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48923..49810
-----------------
DNA (888bp)
protein (296aa)
fda; fructose-bisphosphate aldolase class 1 (EC:4.1.2.13)
Fructose-bisphosphate aldolase class 1 {ECO:0000256|HAMAP-Rule:MF_00729}; EC=4.1.2.13 {ECO:0000256|HAMAP-Rule:MF_00729};; Fructose-bisphosphate aldolase class I {ECO:0000256|HAMAP-Rule:MF_00729}; TaxI
Fructose-bisphosphate aldolase class 1 n=1 Tax=Corynebacterium sp. HFH0082 RepID=S2XUN9_9CORY
DolZOral124_scaffold_534_43
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(50304..50879)
-----------------
DNA (576bp)
protein (192aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=CG_Nitrosp_02
5-formyltetrahydrofolate cyclo-ligase family protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AE50_CARHZ
5-formyltetrahydrofolate cyclo-ligase
DolZOral124_scaffold_534_44
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51113..53392)
-----------------
DNA (2280bp)
protein (760aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MWB3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EGS30780.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral
2', 3'-cyclic nucleotide 2'-phosphodiesterase
DolZOral124_scaffold_534_45
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53679..54365
-----------------
DNA (687bp)
protein (229aa)
Cell division ATP-binding protein FtsE n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVJ4_ALKMQ
ABC transporter {ECO:0000313|EMBL:KJF27496.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
cell division ATP-binding protein FtsE
DolZOral124_scaffold_534_46
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54349..55251
-----------------
DNA (903bp)
protein (301aa)
Cell division protein FtsX n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVJ3_ALKMQ
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil
DolZOral124_scaffold_534_47
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55259..56413
-----------------
DNA (1155bp)
protein (385aa)
Peptidase M23B n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVJ2_ALKMQ
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABR50210.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredi
DolZOral124_scaffold_534_48
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56437..57669
-----------------
DNA (1233bp)
protein (411aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EOC99552.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EOC99552.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisal
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQZ6_9CLOT
DolZOral124_scaffold_534_49
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

57679..58230
-----------------
DNA (552bp)
protein (184aa)
BH2157 protein n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KAX9_BACHD
N-acetyltransferase {ECO:0000313|EMBL:GAF06120.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
DolZOral124_scaffold_534_50
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58269..59414
-----------------
DNA (1146bp)
protein (382aa)
Putative membrane protein n=2 Tax=Clostridium botulinum RepID=C3KX82_CLOB6
Membrane protein {ECO:0000313|EMBL:KIN82198.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
DolZOral124_scaffold_534_51
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59471..61453
-----------------
DNA (1983bp)
protein (661aa)
UvrABC system protein B n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATJ0_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
Displaying items 31-58 of 58 in total

View Taxonomy