ggKbase home page

DolZOral124_scaffold_746

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_746_1
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..305)
-----------------
DNA (303bp)
protein (101aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Roseburia sp. CAG:100 RepID=R7R6S3_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CDF45768.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environm
oppA; Oligopeptide-binding protein OppA precursor
DolZOral124_scaffold_746_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(446..1648)
-----------------
DNA (1203bp)
protein (401aa)
Putative flavoprotein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVA7_CLOCD
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AEV67461.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strai
DolZOral124_scaffold_746_3
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1681..4347)
-----------------
DNA (2667bp)
protein (889aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli
Aconitate hydratase 1 n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SKE1_9BACL
aconitate hydratase 1
DolZOral124_scaffold_746_4
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4623..6344)
-----------------
DNA (1722bp)
protein (574aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKY8_9CLOT
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:EMS69188.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostri
hypothetical protein
DolZOral124_scaffold_746_5
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6338..8134)
-----------------
DNA (1797bp)
protein (599aa)
Predicted transport protein, ATPase and permease component n=2 Tax=Clostridium kluyveri RepID=A5N6D5_CLOK5
transport protein, ATPase and permease
Predicted transport protein, ATPase and permease component {ECO:0000313|EMBL:EDK32866.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
DolZOral124_scaffold_746_6
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8209..9114)
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI0003467EAB
AraC family transcriptional regulator {ECO:0000313|EMBL:ERK30263.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestin
helix-turn-helix domain-containing protein
DolZOral124_scaffold_746_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(9320..10309)
-----------------
DNA (990bp)
protein (330aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MSV6_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CDB98964.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
DolZOral124_scaffold_746_8
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10514..11035
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZIW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28852.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
DolZOral124_scaffold_746_9
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

Not on your lists

11211..12503
-----------------
DNA (1293bp)
protein (431aa)
Putative uncharacterized protein id=2105185 bin=GWE2_Clostridiales_32_10 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein Tax=GWE2_Clostridiales_32_10_curated
similar to ATPase
DolZOral124_scaffold_746_10
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12677..13420)
-----------------
DNA (744bp)
protein (248aa)
gpmA; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Treponema denticola RepID=M2CLH6_TREDN
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
DolZOral124_scaffold_746_11
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13667..14338)
-----------------
DNA (672bp)
protein (224aa)
putative peroxiredoxin (EC:1.11.1.15) rbh
Antioxidant, AhpC/TSA family n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JU69_9FIRM
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:ERJ83542.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ora
DolZOral124_scaffold_746_12
unknown

Not on your lists

comp(14417..14584)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

DolZOral124_scaffold_746_13
Streptococcus infantarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14781..15548
-----------------
DNA (768bp)
protein (256aa)
Uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SGD5_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EDT46748.1}; TaxID=471872 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus infantarius subsp.
hypothetical protein
DolZOral124_scaffold_746_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15561..16013
-----------------
DNA (453bp)
protein (151aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLS6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CRH81304.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia tra
Pyridoxamine 5'-phosphate oxidase.
DolZOral124_scaffold_746_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(16456..17061)
-----------------
DNA (606bp)
protein (202aa)
GTP-binding protein YsxC n=1 Tax=Marinococcus halotolerans RepID=UPI0003B5F22F
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
GTP-binding protein YsxC
DolZOral124_scaffold_746_16
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17058..18359)
-----------------
DNA (1302bp)
protein (434aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AR31_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_746_17
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18369..18968)
-----------------
DNA (600bp)
protein (200aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=16 Tax=Clostridium botulinum RepID=CLPP_CLOB1
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_746_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18961..20247)
-----------------
DNA (1287bp)
protein (429aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Clostridium sp. CAG:277 RepID=R7JWR1_9CLOT
trigger factor
DolZOral124_scaffold_746_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20318..21496)
-----------------
DNA (1179bp)
protein (393aa)
aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II n=1 Tax=Clostridium sp. CAG:221 RepID=R6GR76_9CLOT
Aminotransferase class I and II {ECO:0000313|EMBL:CDB16687.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo
DolZOral124_scaffold_746_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21517..21957)
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H842_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35461.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
flagellar export protein FliJ
DolZOral124_scaffold_746_21
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21957..23267)
-----------------
DNA (1311bp)
protein (437aa)
flagellar protein export ATPase FliI (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8H9_9FIRM rbh
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_746_22
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23254..23985)
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JWX0_9CLOT
FliH; flagellar biosynthesis/type III secretory pathway protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_746_23
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24011..25012)
-----------------
DNA (1002bp)
protein (334aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNQ7_9FIRM
flagellar motor switch protein FliG
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_746_24
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25015..26613)
-----------------
DNA (1599bp)
protein (533aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HXG5_9CLOT
flagellar biosynthesis/type III secretory pathway lipoprotein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_746_25
Pseudothermotoga lettingae, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(26635..26940)
-----------------
DNA (306bp)
protein (102aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F3B9_THELT
flagellar hook-basal body complex subunit FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=416591 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudotherm
DolZOral124_scaffold_746_26
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26945..27382)
-----------------
DNA (438bp)
protein (146aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVI2_CLOCD
flagellar basal-body rod protein FlgC
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_746_27
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27394..27747)
-----------------
DNA (354bp)
protein (118aa)
Flagellar basal body rod protein FlgB n=1 Tax=Clostridium sp. CAG:590 RepID=R5E8K3_9CLOT
flagellar basal-body rod protein FlgB
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_746_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27899..28660)
-----------------
DNA (762bp)
protein (254aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H720_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_746_29
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28665..30734)
-----------------
DNA (2070bp)
protein (690aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=2 Tax=Bacteria RepID=R7AEI1_9BACE
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_746_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30993..31241)
-----------------
DNA (249bp)
protein (83aa)
Methyltransferase domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HT45_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CCY32938.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="
Methylase involved in ubiquinone/menaquinone biosynthesis
Displaying items 1-30 of 52 in total

View Taxonomy