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DolZOral124_scaffold_772

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_772_1
unknown

Not on your lists

2..118
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

DolZOral124_scaffold_772_2
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

408..2057
-----------------
DNA (1650bp)
protein (550aa)
NAD binding site:Flavin-containing monooxygenase FMO n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJE0_9RHOB rbh
FAD-binding dehydrogenase {ECO:0000313|EMBL:KGM50548.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 2
hypothetical protein
DolZOral124_scaffold_772_3
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2175..3023
-----------------
DNA (849bp)
protein (283aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DWC3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM89347.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucos
hypothetical protein
DolZOral124_scaffold_772_4
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3140..4465)
-----------------
DNA (1326bp)
protein (442aa)
Serine hydroxymethyltransferase n=1 Tax=Roseovarius sp. TM1035 RepID=A6DZ91_9RHOB rbh
Serine hydroxymethyltransferase {ECO:0000313|EMBL:EDM32476.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovariu
glycine hydroxymethyltransferase
DolZOral124_scaffold_772_5
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4847..5554)
-----------------
DNA (708bp)
protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627, ECO:0000256|SAAS:SAAS00035203};;
deoD; purine nucleoside phosphorylase deoD-type (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Ruegeria sp. R11 RepID=B7QRL3_9RHOB
DolZOral124_scaffold_772_6
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5703..7682)
-----------------
DNA (1980bp)
protein (660aa)
mutB; methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CQ63_9RHOB rbh
Protein meaA {ECO:0000313|EMBL:KIC46548.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
DolZOral124_scaffold_772_7
unknown

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comp(8023..8259)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

DolZOral124_scaffold_772_8
unknown

Not on your lists

comp(8290..8469)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

DolZOral124_scaffold_772_9
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8542..9945
-----------------
DNA (1404bp)
protein (468aa)
Glycerol-3-phosphate 1-O-acyltransferase {ECO:0000256|SAAS:SAAS00182414}; EC=2.3.1.15 {ECO:0000256|SAAS:SAAS00182414};; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacte
Acyltransferase family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E140_9RHOB rbh
acyltransferase family protein
DolZOral124_scaffold_772_10
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10056..11345
-----------------
DNA (1290bp)
protein (430aa)
Crotonyl-CoA carboxylase/reductase n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V8A7_9RHOB
Crotonyl-CoA carboxylase/reductase {ECO:0000313|EMBL:ERL98941.1}; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae ba
crotonyl-CoA reductase
DolZOral124_scaffold_772_11
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11673..11882
-----------------
DNA (210bp)
protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC46550.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.
DolZOral124_scaffold_772_12
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11830..12546
-----------------
DNA (717bp)
protein (239aa)
Autoinducer-binding transcriptional regulator LuxR n=1 Tax=Citreicella sp. 357 RepID=I1AXG1_9RHOB rbh
Autoinducer-binding transcriptional regulator LuxR {ECO:0000313|EMBL:EIE51182.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;"
rhlR; transcriptional activator protein RaiR
DolZOral124_scaffold_772_13
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12632..13264
-----------------
DNA (633bp)
protein (211aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1515334 species="B
Autoinducer synthesis protein n=1 Tax=Sagittula stellata E-37 RepID=A3K3I5_9RHOB
tral; autoinducer synthesis protein Tral
DolZOral124_scaffold_772_14
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13312..14841
-----------------
DNA (1530bp)
protein (510aa)
Helicase, ATP-dependent, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKF9_9RHOB rbh
Helicase, ATP-dependent, putative {ECO:0000313|EMBL:EAP77840.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovari
ATPase
DolZOral124_scaffold_772_15
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14838..15554
-----------------
DNA (717bp)
protein (239aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseovarius sp. 217 RepID=A3W475_9RHOB rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM50564.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 2
short-chain dehydrogenase/reductase SDR
DolZOral124_scaffold_772_16
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15551..16333)
-----------------
DNA (783bp)
protein (261aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B016_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ40997.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacte
hypothetical protein
DolZOral124_scaffold_772_17
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16314..17237)
-----------------
DNA (924bp)
protein (308aa)
Membrane protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NRS5_9RHOB rbh
Permease {ECO:0000313|EMBL:KIC51249.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
membrane protein
DolZOral124_scaffold_772_18
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17345..18310)
-----------------
DNA (966bp)
protein (322aa)
sugar ABC transporter permease n=1 Tax=Ruegeria conchae RepID=UPI000237B5AB rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KGB81196.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum
permease
DolZOral124_scaffold_772_19
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18310..19404)
-----------------
DNA (1095bp)
protein (365aa)
UPI0003D1A95A related cluster n=1 Tax=unknown RepID=UPI0003D1A95A rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM50474.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola
nucleoside ABC transporter membrane protein
DolZOral124_scaffold_772_20
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19406..20935)
-----------------
DNA (1530bp)
protein (510aa)
Sugar ABC transporter, ATP-binding protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LXG3_RUEPO rbh
sugar ABC transporter, ATP-binding protein
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAV93696.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ru
DolZOral124_scaffold_772_21
unknown

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comp(20932..21111)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

DolZOral124_scaffold_772_22
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21181..22170)
-----------------
DNA (990bp)
protein (330aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V743_9RHOB rbh
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:ERL98526.1}; Flags: Precursor;; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
sugar ABC transporter substrate-binding protein
DolZOral124_scaffold_772_23
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22305..22646)
-----------------
DNA (342bp)
protein (114aa)
rimI; ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-S18p-alanine acetyltransferase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RU42_9RHOB
Ribosomal-protein-S18p-alanine acetyltransferase {ECO:0000313|EMBL:EPX81555.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;
DolZOral124_scaffold_772_24
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22756..23376)
-----------------
DNA (621bp)
protein (207aa)
M22 family peptidase (EC:3.4.24.57)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00038195FB
Peptidase M22 {ECO:0000313|EMBL:KDB04290.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;
DolZOral124_scaffold_772_25
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23743..24315)
-----------------
DNA (573bp)
protein (191aa)
NifU domain protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CPR5_9RHOB rbh
NifU domain protein {ECO:0000313|EMBL:EEX08581.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerule
nitrogen-fixing NifU-like
DolZOral124_scaffold_772_26
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24420..24875)
-----------------
DNA (456bp)
protein (152aa)
Universal stress family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SIL3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:BAQ67922.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidoph
universal stress family protein
DolZOral124_scaffold_772_27
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24936..25805)
-----------------
DNA (870bp)
protein (290aa)
Aminotransferase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CPR2_9RHOB rbh
Aminotransferase {ECO:0000313|EMBL:KEJ96104.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudoni
aminotransferase, class IV
DolZOral124_scaffold_772_28
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26030..27046)
-----------------
DNA (1017bp)
protein (339aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA synthetase TrpS (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B002_9RHOB rbh
DolZOral124_scaffold_772_29
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27123..27812
-----------------
DNA (690bp)
protein (230aa)
Rhomboid family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2E6_9RHOB
Protease {ECO:0000313|EMBL:KJS40929.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
peptidase S54-like protein
DolZOral124_scaffold_772_30
unknown

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27888..28130
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

View Taxonomy