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DolZOral124_scaffold_852

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_852_1
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(3..641)
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum CTI-6 RepID=U7TUN8_FUSNU
Predicted AAA-ATPase {ECO:0000313|EMBL:CKG60226.1}; TaxID=76857 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. polymorphum.
hypothetical protein
DolZOral124_scaffold_852_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(825..1763)
-----------------
DNA (939bp)
protein (313aa)
Carbamate kinase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GSH7_FILAD
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H5321
carbamate kinase
DolZOral124_scaffold_852_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1777..2769)
-----------------
DNA (993bp)
protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
arcB; ornithine carbamoyltransferase 1 (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE16_9CLOT rbh
DolZOral124_scaffold_852_4
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3063..4295)
-----------------
DNA (1233bp)
protein (411aa)
arcA; Arginine deiminase (ADI) (Arginine dihydrolase) (AD) (EC:3.5.3.6)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS000
Arginine deiminase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PX86_CLOSD rbh
DolZOral124_scaffold_852_5
unknown

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comp(5046..5459)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

DolZOral124_scaffold_852_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5459..6868)
-----------------
DNA (1410bp)
protein (470aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS71526.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT
hypothetical protein
DolZOral124_scaffold_852_7
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6877..7605)
-----------------
DNA (729bp)
protein (243aa)
RNA polymerase sigma-28 subunit FliA/WhiG (EC:4.1.1.65)
RNA polymerase sigma factor n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRM8_ALKMQ
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
DolZOral124_scaffold_852_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7615..8100)
-----------------
DNA (486bp)
protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRM9_ALKMQ
chemoreceptor glutamine deamidase CheD
DolZOral124_scaffold_852_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8097..8720)
-----------------
DNA (624bp)
protein (208aa)
Chemotaxis protein CheC--inhibitor of MCP methylation n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLZ3_9CLOT
Chemotaxis protein CheC--inhibitor of MCP methylation {ECO:0000313|EMBL:EOC99730.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source
CheC, inhibitor of MCP methylation
DolZOral124_scaffold_852_10
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8734..9171)
-----------------
DNA (438bp)
protein (146aa)
Chemotaxis protein CheW n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1L8_CLOA9
Chemotaxis protein CheW {ECO:0000313|EMBL:KGG80825.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
cheW2; chemotaxis protein CheW
DolZOral124_scaffold_852_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9182..11254)
-----------------
DNA (2073bp)
protein (691aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacte
CheA signal transduction histidine kinase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHG2_ALKOO
CheA signal transduction histidine kinase
DolZOral124_scaffold_852_12
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11258..12334)
-----------------
DNA (1077bp)
protein (359aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRN3_ALKMQ
DolZOral124_scaffold_852_13
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12348..13244)
-----------------
DNA (897bp)
protein (299aa)
Site-determining protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVF7_CLOCD
chromosome partitioning ATPase
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (
DolZOral124_scaffold_852_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13237..14481)
-----------------
DNA (1245bp)
protein (415aa)
Flagellar biosynthesis protein FlhF n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBM7_9CLOT
Flagellar biosynthesis protein FlhF {ECO:0000313|EMBL:EOC99724.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacte
GTP-binding signal recognition particle
DolZOral124_scaffold_852_15
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14481..16520)
-----------------
DNA (2040bp)
protein (680aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKX3_ALKMQ
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KJF25949.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
flagellar biosynthesis protein FlhA
DolZOral124_scaffold_852_16
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16520..17611)
-----------------
DNA (1092bp)
protein (364aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHF6_ALKOO
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KJF25950.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
flagellar biosynthetic protein FlhB
DolZOral124_scaffold_852_17
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17627..18397)
-----------------
DNA (771bp)
protein (257aa)
Flagellar biosynthetic protein fliR n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I3N6_CLOCE
fliR; flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium ce
DolZOral124_scaffold_852_18
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18407..18673)
-----------------
DNA (267bp)
protein (89aa)
Flagellar biosynthetic protein FliQ n=2 Tax=Paenibacillus RepID=C6IVX2_9BACL
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EES75068.1}; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral ta
flagellar biosynthetic protein FliQ
DolZOral124_scaffold_852_19
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18673..19416)
-----------------
DNA (744bp)
protein (248aa)
flagellar biosynthetic protein FliP (EC:3.1.1.3)
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:ABR48859.1}; EC=3.1.1.3 {ECO:0000313|EMBL:ABR48859.1};; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Flagellar biosynthetic protein FliP n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRP1_ALKMQ
DolZOral124_scaffold_852_20
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19406..19798)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:EOS51620.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
DolZOral124_scaffold_852_21
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19798..20160)
-----------------
DNA (363bp)
protein (121aa)
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARD1_9CLOT
Chemotaxis protein CheY {ECO:0000313|EMBL:KGG80744.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
response regulator receiver protein
DolZOral124_scaffold_852_22
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20181..21326)
-----------------
DNA (1146bp)
protein (382aa)
CheC, inhibitor of MCP methylation n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRP4_ALKMQ
flagellar motor switch protein
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:ABR48862.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallired
DolZOral124_scaffold_852_23
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21319..22308)
-----------------
DNA (990bp)
protein (330aa)
Flagellar motor switch protein FliM n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKX0_ALKMQ
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:ABR46838.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallire
DolZOral124_scaffold_852_24
unknown

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comp(22357..22797)
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

DolZOral124_scaffold_852_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22807..23565)
-----------------
DNA (759bp)
protein (253aa)
OmpA/MotB domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHE8_ALKOO
Flagellar motor protein MotB {ECO:0000313|EMBL:KGG80747.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azore
OmpA/MotB domain-containing protein
DolZOral124_scaffold_852_26
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23558..24346)
-----------------
DNA (789bp)
protein (263aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRP8_ALKMQ
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ABR48866.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens
DolZOral124_scaffold_852_27
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(24346..24594)
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035F4EB3
flagellar FlbD family protein; K02385 flagellar protein FlbD Tax=RBG_16_Planctomycetes_59_8_curated
FlgEa; hypothetical protein
DolZOral124_scaffold_852_28
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24671..26107)
-----------------
DNA (1437bp)
protein (479aa)
Fagellar hook-basal body protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1THP2_9CLOT
Fagellar hook-basal body protein {ECO:0000313|EMBL:EGD46024.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyr
fagellar hook-basal body protein
DolZOral124_scaffold_852_29
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26179..26565)
-----------------
DNA (387bp)
protein (129aa)
Flagellar operon protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHE4_ALKOO
flagellar operon protein
Flagellar operon protein {ECO:0000313|EMBL:ABW19031.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain O
DolZOral124_scaffold_852_30
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(26580..27083)
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036BA5BE
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD Tax=GWC1_Treponema_61_84_curated
flagellar hook capping protein
Displaying items 1-30 of 51 in total

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