ggKbase home page

DolZOral124_scaffold_1401_14

Organism: DolZOral124_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 34 / 38 MC: 25
Location: comp(20871..21665)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037DDC76 similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 252.0
  • Bit_score: 398
  • Evalue 7.20e-108
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 252.0
  • Bit_score: 396
  • Evalue 4.50e-108
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 252.0
  • Bit_score: 396
  • Evalue 2.30e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirochaeta smaragdinae → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 795
ATGTCGGATAATGAAATAGAAATTGGCGGAGTACCAGAAAAAGAACTTTGGAAAAAGTACCGCAGTACCGGAGACCAGTCTATTCGGGACTCCATTGTCAGGCAGTATGCGCCGCTGGTGAAATATGTGGCCGGTAAGGTTTCTGTGGGTATGCCTCAGAATGTGGATTTTGACGATTTGGTGGGTTTCGGTGTTTTTGGCCTCTTCGATGCCATAGAAAAGTTTGATACCGAAAAGCATGTCAAGTTCAAAACATACGCGGTTACACGTATCCGGGGGGCCATCTTTGATGAACTGCGCTCCATAGACTGGGTTCCGCGCTCTGTCCGTCAGAAGAGCCGTGAAATTGATGAAACAGTACAGCATCTGGAGGCGCGGCTGGGCCGGGCCGCCACAGATGAAGAAGTTGCCGCGGAAATGGGTTTGAGCATGGAACAGTACAATCAGATGATGCTCAAAGTAAGCGGTTCCTCCATGCTTTCCCTGAATGACATATGGCTGAACGGCGACGAAAACGACAAAATATCCATAGTGGAAAGTATTGAGTCTCCATCTTCTCTCCGTCCGGACGCCATTGCTGAAAAAGGCGAAATGCGCCGGGTTATTGTTGAAGCCATTCAGGAACTTCCGGAAAAGGAAAAAAAGGTTCTTATTTTATATTATTACGAAGACCTCACCTTAAAAGAAATAGGCAAAGTACTGGATGTTACCGAGTCGCGTATTTCCCAGCTGCATACCAAGGCCATAAGCCGCCTGCGTTCCAAGCTGACAAATATTAAAAAAGGAATTTTCTAG
PROTEIN sequence
Length: 265
MSDNEIEIGGVPEKELWKKYRSTGDQSIRDSIVRQYAPLVKYVAGKVSVGMPQNVDFDDLVGFGVFGLFDAIEKFDTEKHVKFKTYAVTRIRGAIFDELRSIDWVPRSVRQKSREIDETVQHLEARLGRAATDEEVAAEMGLSMEQYNQMMLKVSGSSMLSLNDIWLNGDENDKISIVESIESPSSLRPDAIAEKGEMRRVIVEAIQELPEKEKKVLILYYYEDLTLKEIGKVLDVTESRISQLHTKAISRLRSKLTNIKKGIF*