ggKbase home page

DolZOral124_scaffold_3924_7

Organism: DOLZORAL124_WWE1X_31_13

near complete RP 50 / 55 BSCG 50 / 51 ASCG 14 / 38
Location: comp(6793..8223)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN id=3500052 bin=GWF2_WWE1_40_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 428.0
  • Bit_score: 424
  • Evalue 1.30e-115
RNA polymerase, sigma 54 subunit, RpoN Tax=RBG_16_Caldithrix_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 481.0
  • Bit_score: 379
  • Evalue 5.20e-102
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 527.0
  • Bit_score: 361
  • Evalue 3.80e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Caldithrix_48_16_curated → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 1431
ATGCTTAAAACAGGTTTATCGACATCATTAAAATTGGAAACAAGAATTGATCCGGCTTTAATTTTAAGATCAGAGCTTTTGGAACTACCTCTACTTCAACTTGATAATAGAATCCAACTTGAACTTTCTACAAACCCCTTTCTTCTTACTGAAGCTGAGATTGAAGAAGAGATAGTAGAACAGGAGGAAGTGGAAACTCCTGAGGAGAAAGAAAAAGAGGAAGAGATTGATTGGGAGGAGTATGTACAGGATTTTTCCAATTATGAAGATAACTACCCTGTTATGTATGATAAAGACAGAGAAGAGATAGAGTTTCAGCCTCCAATAGAGAAAACCCTTGAAGATTCCCTTTTAGAGCAGATCCAAAACGGAAACTTTTCTCCGTTAGAACAGGAGATAGCCTCTGAAATTATAGGAAATCTTGATAAAGATGGATACCTTGCTTGTCCATTTTATGATATTACAAAAAACTTTAGTGATGTAGAAGAGTATGTTGTAGAAGAGACCCTTTTAAAGGTTCAGAAACTGGATCCTGTTGGTGTTGCTGCAAGGGATATAAAGGAGTGCTTAATAGTTCAATTAACTTCAAGGGAACTCTACATTGAAGATTCATACATAGTTTTAAGAGACTACTACCAAGATTTTGTTAATAAAAGATATAAAAAGATAATGAAAAAAACCGGCATTAATGAGGAGCAGATGCAGGAGGTTATTGAAGAGATAACCTCATTAAATCCAAGGCCGGGAATCTCAAGACATATCTCCCTATGGGAAAAAGCAGATCAACTTTCTGAAAAAAGAGATGCAATAACCCCTGATTTTTATGTTAGAGAGATTGATGGAGAGCTTGAAGTACTTGTAAATGATTCAACAATACCAAACCTTAGTATAAATCAGAACTACAGTAATTTGATACTTTCCAATACAGCTGAAAAGACAGCTAAAGATTTTGTAAAAAAGAAGTTGGAATCAGCAAGATGGTTTATAAATGCCATCATGCAGAGAAAACAGACTCTAAGAAAGGTTATGAGATCTATAATCAAGTTTCAAGAGGAGTTCTTTTTTGAAGGACCGTCAAAGATAAAACCTTTGATACTGAAAGATGTAGCCGAAGATATAGAGATGGATGTAACAACAGTTTCAAGATGTACCAAGGAGAAGTATGTTGATACCGACTATGGAATATTTGAGCTGAAATATTTTTTTACAGATAAACTTTCTACAACTTCAGGAGAGATTGTATCCACAACCATTGTAAAAGACAGAGTAAAGAGTATGATTGAAAATGAGGATAAGAAAAAACCTCTTTCAGATCAAAAGATATCGGAGCTTTTAAAAGAAGAGGGTCATACAGCAGCCAGAAGAACAGTACAGAAGTATAGAGAGCAACTTCAAATACCTGTTGCAAGATTGAGGAAAGATATTTTTTAA
PROTEIN sequence
Length: 477
MLKTGLSTSLKLETRIDPALILRSELLELPLLQLDNRIQLELSTNPFLLTEAEIEEEIVEQEEVETPEEKEKEEEIDWEEYVQDFSNYEDNYPVMYDKDREEIEFQPPIEKTLEDSLLEQIQNGNFSPLEQEIASEIIGNLDKDGYLACPFYDITKNFSDVEEYVVEETLLKVQKLDPVGVAARDIKECLIVQLTSRELYIEDSYIVLRDYYQDFVNKRYKKIMKKTGINEEQMQEVIEEITSLNPRPGISRHISLWEKADQLSEKRDAITPDFYVREIDGELEVLVNDSTIPNLSINQNYSNLILSNTAEKTAKDFVKKKLESARWFINAIMQRKQTLRKVMRSIIKFQEEFFFEGPSKIKPLILKDVAEDIEMDVTTVSRCTKEKYVDTDYGIFELKYFFTDKLSTTSGEIVSTTIVKDRVKSMIENEDKKKPLSDQKISELLKEEGHTAARRTVQKYREQLQIPVARLRKDIF*