ggKbase home page

ACD25_95_3 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
hypothetical protein rbh KEGG
DB: KEGG
97.6 999.99 1979 0.0 wwe:P147_WWE3C01G0053
hypothetical protein similarity KEGG
DB: KEGG
97.6 999.99 1979 0.0 wwe:P147_WWE3C01G0053
DNA-directed RNA polymerase subunit beta n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZZ4_THERP (db=UNIREF evalue=0.0 bit_score=1009.0 identity=48.85 coverage=98.3809523809524) similarity UNIREF
DB: UNIREF
48.85 98.38 1009 0.0 wwe:P147_WWE3C01G0053
seg (db=Seg db_id=seg from=544 to=557) iprscan interpro
DB: Seg
null null null null wwe:P147_WWE3C01G0053
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=1 to=1044 evalue=0.0) iprscan interpro
DB: superfamily
null null null 0.0 wwe:P147_WWE3C01G0053
DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=333 to=1036 evalue=0.0 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: ribonucleoside binding (GO:0032549)) iprscan interpro
DB: HMMPanther
null null null 0.0 wwe:P147_WWE3C01G0053
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=333 to=1036 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 wwe:P147_WWE3C01G0053
RNA_POL_BETA (db=PatternScan db_id=PS01166 from=808 to=820 evalue=0.0 interpro_id=IPR007121 interpro_description=RNA polymerase, beta subunit, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: PatternScan
null null null 0.0 wwe:P147_WWE3C01G0053
rpoB: DNA-directed RNA polymerase, beta subu (db=HMMTigr db_id=TIGR02013 from=1 to=1030 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMTigr
null null null 0.0 wwe:P147_WWE3C01G0053
RNA_pol_Rpb2_6 (db=HMMPfam db_id=PF00562 from=512 to=955 evalue=7.0e-131 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 7.00e-131 wwe:P147_WWE3C01G0053
no description (db=Gene3D db_id=G3DSA:3.90.1100.10 from=5 to=563 evalue=1.8e-89) iprscan interpro
DB: Gene3D
null null null 1.80e-89 wwe:P147_WWE3C01G0053
no description (db=Gene3D db_id=G3DSA:2.40.270.10 from=578 to=941 evalue=2.5e-58) iprscan interpro
DB: Gene3D
null null null 2.50e-58 wwe:P147_WWE3C01G0053
RNA_pol_Rpb2_7 (db=HMMPfam db_id=PF04560 from=957 to=1031 evalue=1.7e-25 interpro_id=IPR007641 interpro_description=RNA polymerase Rpb2, domain 7 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 1.70e-25 wwe:P147_WWE3C01G0053
RNA_pol_Rpb2_3 (db=HMMPfam db_id=PF04565 from=357 to=426 evalue=1.2e-23 interpro_id=IPR007645 interpro_description=RNA polymerase Rpb2, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 1.20e-23 wwe:P147_WWE3C01G0053
RNA_pol_Rpb2_2 (db=HMMPfam db_id=PF04561 from=130 to=297 evalue=6.0e-22 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 6.00e-22 wwe:P147_WWE3C01G0053
RNA_pol_Rpb2_1 (db=HMMPfam db_id=PF04563 from=1 to=353 evalue=1.2e-17 interpro_id=IPR007644 interpro_description=RNA polymerase, beta subunit, protrusion GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 1.20e-17 wwe:P147_WWE3C01G0053
RNA_pol_Rpb2_45 (db=HMMPfam db_id=PF10385 from=446 to=504 evalue=1.6e-09 interpro_id=IPR019462 interpro_description=DNA-directed RNA polymerase, beta subunit, external 1 domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 1.60e-09 wwe:P147_WWE3C01G0053
RNApol_bact_RpoB (db=HAMAP db_id=MF_01321 from=1 to=1033 evalue=10.676 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HAMAP
null null null 1.07e+01 wwe:P147_WWE3C01G0053
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFOXYD2_FULL_WWE3_43_10_curated UNIPROT
DB: UniProtKB
99.9 999.99 2019 0.0 ggdbv1_90052024
mta:Moth_2468 rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] alias=RAAC2_WWE3_C00001G00053,RAAC2_WWE3_53 id=725100 tax=RAAC2_WWE3 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 similarity UNIREF
DB: UNIREF90
97.5 null 1980 0.0 wwe:P147_WWE3C01G0053