ggKbase home page

ar4r2_scaffold_16934_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(3..1379)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=870187 species="Bacteria; Proteobacteria; Gamm similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 459.0
  • Bit_score: 731
  • Evalue 8.80e-208
Ribonuclease R n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 459.0
  • Bit_score: 732
  • Evalue 2.80e-208
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 457.0
  • Bit_score: 569
  • Evalue 6.80e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
TTGAAGTTTAAAGACCCCCATCACCAGCGCGAAGCTGAGAAGTACGATAACCCGATTCCCAGCCGCGAAGTCATTTTGCAATTACTGGGTGAACAAGGGCAACCGCTGGACTTTATGACACTGGCAAATGCTCTGCATCTCCATGAAGAGATGGATCTTGATGCCCTCAAAAAACGCTTACGGGCAATGGAGCGGGATGGGCAATTACTTTACAACCGCCGTCGTCAATACGTCCCTATTGCTCGTACCGATTTAATCGCAGGGCGCGTTATCGGACACGCCGACGGATTTGGCTTCCTGAAACCGGACGATGGCAGTGCCGATCTGTTTTTGCACGCTAAACAAATGCGCACTTTAATGCACGGCGACCGGGCGTTAGTCAGTGTACGCGGACTTGACCCCAAAGGGCGGCGCGAAGGTGCGTTGGTTGAAGTATTAGAACGTGGCACAATACAAGTGGTCGGGCGTTATTTTGTGGAAGGTGGCATTGGTTTTGTTGCACCCGACAACGCTCGCTTAAATCAAGATATTCTGATTCCCAGCGATGCTACCGGTGGTGCAGTGCATGGGCAGATTGTCGTTGCCAGCATTGTGGAACAGCCTTCCAAACGCGCTCAACCCAGCGGTAAAATTGTCGAAGTATTAGGTGATCACATGGCTCCAGGTATGGAGATCAATGTCGCGATGCGCAGTCATGAACTGCCTTTCGTGTGGCCTGATGAAGTCACTGAGGAAGCCGATCAGTTTAGTGTCAATGTCGCGGAAAGCGATGCAGCGAATCGTTGGGATTTACGCAAACTACCGTTAGTCACAATTGACGGCGAAGATTCCAAAGACTTTGATGATGCTGTTTATTGCGAACGTGAAGGCAATAACTGGCGTTTATTGGTGGCGATTGCTGACGTATCGCACTATGTGCGCCCCGGCATGGCAATTGATCGTGAAGCACGCGAACGCGGTACATCGGTATATTTCCCCGGCAAAGTCATTCCTATGTTGCCGGAAATTCTCTCCAACGGTTTATGCTCACTTAACCCGCAAGTCGACCGTTTGTGTATGGTATGTGAAATTCATATCGGCGCGCGCGGTAAGTTACTCAGCTATCAATTTGCGGAAGGCATTATGCATTCGGCAGCACGTTTGACGTACACCAAAGTTGCCGACATGGTGGTGCAACGTAACCCGGCTGCGCGGGCGGATTATTCAACGCCTGTGATTGAGTGTGTGGATGAATTATACGCTTTGTACAAAGTGTTACGTAAAGCGCGTGATAAACGTGGTGCGATTGATTTTGAAACGGCTGAAACGCGCATTGTGTTTGATGCAGATCGTAAAATCGAAGCGATTGTTCCCACAGAACGCAATGACGCTCACAAA
PROTEIN sequence
Length: 459
LKFKDPHHQREAEKYDNPIPSREVILQLLGEQGQPLDFMTLANALHLHEEMDLDALKKRLRAMERDGQLLYNRRRQYVPIARTDLIAGRVIGHADGFGFLKPDDGSADLFLHAKQMRTLMHGDRALVSVRGLDPKGRREGALVEVLERGTIQVVGRYFVEGGIGFVAPDNARLNQDILIPSDATGGAVHGQIVVASIVEQPSKRAQPSGKIVEVLGDHMAPGMEINVAMRSHELPFVWPDEVTEEADQFSVNVAESDAANRWDLRKLPLVTIDGEDSKDFDDAVYCEREGNNWRLLVAIADVSHYVRPGMAIDREARERGTSVYFPGKVIPMLPEILSNGLCSLNPQVDRLCMVCEIHIGARGKLLSYQFAEGIMHSAARLTYTKVADMVVQRNPAARADYSTPVIECVDELYALYKVLRKARDKRGAIDFETAETRIVFDADRKIEAIVPTERNDAHK