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ar4r2_scaffold_28132_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(3..1058)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=870187 species="Bacteria; Proteobacteria; Gamm similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 352.0
  • Bit_score: 548
  • Evalue 8.10e-153
Ribonuclease R n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 352.0
  • Bit_score: 548
  • Evalue 5.70e-153
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 353.0
  • Bit_score: 456
  • Evalue 4.90e-126

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGCACGGCGACCGTGCGTTAGTGAGTGTACGCGGGCTTGACCCCAAAGGGCGGCGTGAAGGTGCGCTGGTTGAAGTCTTAGAACGCGGCACAGTACAAGTGGTCGGGCGTTACTTTGTGGAAGGTGGCATTGGTTTTGTTGCACCGGACAATGCCCGCTTAAACCAGGATATTTTGATTCCAAGTGATGCTGCCGGTGGTGCAGTGCATGGGCAGATCGTGGTTGCCAGCATCGTGGAACAGCCTTCCAAACGCGCTCAACCCAGCGGCAAAATTGTCGAAGTATTGGGTGACCACATGGCTCCCGGCATGGAAATCAATGTCGCGATGCGCAGCCATGAACTGCCATTCGAGTGGCCGGATGAAGTCAGTGAGGAAGCCGACCGTTTTAGCGTAAATGTCGCGGAAACTGATGCTGCGAACCGTTGGGATTTACGCCAATTACCGTTAGTAACCATTGACGGCGAAGATTCCAAAGACTTTGACGACGCAGTTTATTGCGAACGCGAAGGCAATAACTGGCGTTTATTGGTAGCCATTGCGGACGTATCACATTATGTGCGCCCCGGTATGGCGATTGATCGTGAAGCACGCGAACGTGGTACATCGGTGTATTTCCCCGGCAAAGTGATTCCGATGTTGCCGGAAATTCTTTCCAACGGTTTGTGCTCACTGAATCCGCAAGTTGATCGCTTGTGCATGGTGTGTGAAATTCGCATTGGCGCACGCGGTAAGTTACTCAGCTATCAATTCGCGGAAGGCATTATGCATTCGGCGGCACGCTTGACCTACACCAAAGTTGCCGACATGGTGGTGCAGCGTAATCCGACTACCCGTGCGGATTATCCGGCGGCAGTGCTCGACTGCGTGGATGAAGCCTACGCTTTGTACAAAGTATTGCGTAAAGCGCGTGATAAACGCGGCGCGATTGACTTTGAAACGGCTGAAACCCGCATTGTGTTTGATGCTGATCGTAAAATCGAAGCGATTGTTCCCACAGAACGCAATGACGCTCACAAATTGATCGAAGAATGTATGATTCTCGCCAATGTGTGC
PROTEIN sequence
Length: 352
MHGDRALVSVRGLDPKGRREGALVEVLERGTVQVVGRYFVEGGIGFVAPDNARLNQDILIPSDAAGGAVHGQIVVASIVEQPSKRAQPSGKIVEVLGDHMAPGMEINVAMRSHELPFEWPDEVSEEADRFSVNVAETDAANRWDLRQLPLVTIDGEDSKDFDDAVYCEREGNNWRLLVAIADVSHYVRPGMAIDREARERGTSVYFPGKVIPMLPEILSNGLCSLNPQVDRLCMVCEIRIGARGKLLSYQFAEGIMHSAARLTYTKVADMVVQRNPTTRADYPAAVLDCVDEAYALYKVLRKARDKRGAIDFETAETRIVFDADRKIEAIVPTERNDAHKLIEECMILANVC