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ar4r2_scaffold_3121_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1264..2172)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 303.0
  • Bit_score: 424
  • Evalue 1.50e-115
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 302.0
  • Bit_score: 297
  • Evalue 3.30e-78
tRNA pseudouridine synthase B n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 303.0
  • Bit_score: 425
  • Evalue 4.80e-116
  • rbh

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
TTGAGTCGGCGGCGTTTCCGTAAATTAGATGGTATTTTGTTGCTGGATAAAGGCTTAGGTGTCTCCAGCAACAAAGCCCTGCAAGACGCTCGTTTCTTGTTTGAAGCGGAAAAAGCGGGGCATACCGGCAGTCTTGATCCGCTAGCCTCCGGTATGTTGCCGGTGTGTTTTGGTGAAGCTACCAAAGTGTCTGGTTTATTACTGGATTCTGATAAGCGTTACCTGACGACAGCTACCTTGGGTTTTGTGAGTAGTACCGGCGATGCGGAAGGTGAAAAGCTTAATCCGCGTCCGATTCCCGATTTAACTGAAGCTACTATTGAAGACGTTCTGCAACGCTTTCGTGGTGAAATCAGTCAGATTCCCCCCATGCATTCCGCCTTGAAAAAAGCCGGACAGCCGCTGTATAAGTTGGCGCGTCAAGGCATTGAAGTAGAGCGTGAACCCCGTCATGTTACCATTCACGAATTGACCCTATTAGAGCGCACCCCAACCACCTTGAATTTCGCAGTAACGTGCAGCAAAGGCACGTATATTCGTACCCTAGTGGAAGATATTGGTGAAGCCTTAGGTTGTGGGGCTTATGTTTCAGCGTTACGGCGTGAGCGGGTTGATCCGTTCGGGGCTTACCCCATGCATACCTTGGAAAGCTTGCGTGCATTAGCGGATGAACACAGTTTCGCTGCGCTGGATGCCTTGTTATTGCCTATTGATGCGGCCCTACCAAACGTTATGGCATTGACGCTTACTGATGAACAAGTGTTGCGTATTCGTCAGGGGCAGCGTTTCGAGGTTGAGGTAGCAGGCGATTGTGAACTATTGCGATTGTATGATAATGCCGGATTATTCATCGGTTTGGGCAGTGTTGCGCAAGGTAATTTGAGTGTGCGCCGCCTTTTGTCGTATTGA
PROTEIN sequence
Length: 303
LSRRRFRKLDGILLLDKGLGVSSNKALQDARFLFEAEKAGHTGSLDPLASGMLPVCFGEATKVSGLLLDSDKRYLTTATLGFVSSTGDAEGEKLNPRPIPDLTEATIEDVLQRFRGEISQIPPMHSALKKAGQPLYKLARQGIEVEREPRHVTIHELTLLERTPTTLNFAVTCSKGTYIRTLVEDIGEALGCGAYVSALRRERVDPFGAYPMHTLESLRALADEHSFAALDALLLPIDAALPNVMALTLTDEQVLRIRQGQRFEVEVAGDCELLRLYDNAGLFIGLGSVAQGNLSVRRLLSY*