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ar4r2_scaffold_4084_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 2277..2930

Top 3 Functional Annotations

Value Algorithm Source
Yop virulence translocation R n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWL9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 217.0
  • Bit_score: 360
  • Evalue 1.10e-96
  • rbh
Yop virulence translocation R {ECO:0000313|EMBL:EIJ35762.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 217.0
  • Bit_score: 360
  • Evalue 1.50e-96
T3SS/component VscR1 similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 217.0
  • Bit_score: 249
  • Evalue 7.40e-64

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGAAACCTTACCCAACCCGATTATCCTGCTTGCCATTGTCACGCTGCTGGGACTTGCGCCGTTCATTGCGATTATGATCAGCTCATTCGTGAAACTGGTCATTGTGATGCACTTAATCCGCAGTGCCTTAGGTTTGCAACAAGAACCCCCGAACATTGCGATCAGCGGCATTGCGATTATTCTCTCGGTTTACATCATGGCTCCGGTGGCGATGGAAACCTATGAAATTTTCAATACACACAATGTCAATATCGAGGACATACGCAACCCCTTACTGATGGACGCGCTCAAAGCCAGCAGTGACCCATTGCGGGATTTTTTAACGAAACATTCCACCGACAGCGAACGCCAGTTTTTCGTCGATACCACGCAAAAAATCTGGCCTGAAAAATACGCCAAAGAAATGACTGCCGACAATCTGTTGGTGTTAACCCCTGCCTTTATGGTGAGCGAGCTAACCAATGCGTTTCAGGTGGGTTTTTTGTTATTTCTACCCTTCATTATTATTGACCTCATTATTTCTAATATTTTGATTTCAATGGGAATGATTATGGTGTCGCCAATGGTCATTTCCCTGCCTTTCAAACTATTGCTGTTTGTGCTGGCGGACGGATGGTCACGCCTGATTCACGGCCTGATTCTGAGTTATTGA
PROTEIN sequence
Length: 218
METLPNPIILLAIVTLLGLAPFIAIMISSFVKLVIVMHLIRSALGLQQEPPNIAISGIAIILSVYIMAPVAMETYEIFNTHNVNIEDIRNPLLMDALKASSDPLRDFLTKHSTDSERQFFVDTTQKIWPEKYAKEMTADNLLVLTPAFMVSELTNAFQVGFLLFLPFIIIDLIISNILISMGMIMVSPMVISLPFKLLLFVLADGWSRLIHGLILSY*