ggKbase home page

ar4r2_scaffold_4005_6

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 4060..5343

Top 3 Functional Annotations

Value Algorithm Source
Vi polysaccharide biosynthesis protein vipA/tviB n=1 Tax=Thiothrix flexilis RepID=UPI0003694EA2 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 421.0
  • Bit_score: 667
  • Evalue 1.00e-188
  • rbh
nucleotide sugar dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 420.0
  • Bit_score: 645
  • Evalue 9.10e-183
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AGZ34120.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 420.0
  • Bit_score: 645
  • Evalue 4.50e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. VLB120 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGTTCTTTCAAAGAAACGATAATATTGTTTTATCAATCATAGGCTTGGGCTATGTTGGCTTGCCACTGGCAGTGGCTTTTGGCAAACATTTTTCGACCATTGGTTTTGATACCAACCCTGCTCGTATTGCAGAGCTTCAGAATGGGTATGACCATACCATGGAGGTTGCATCAGCGGCGTTTTGCGAAGCGAAACACTTGCAGTTCACCAGCGAACTTGAAGCCTTACAGGCTGCAAATGTATTCATTGTCACTGTGCCTACGCCGATTGATGTACATAAATCCCCTGATTTGACACCACTGCTCAAAGCCAGCGAGAGTGTCGGCATGGTTATCAAACGTGGTGATGTGGTGATTTATGAGTCCACCGTCTACCCTGGTGCCACCGAGGAAGATTGCATTCCCGTGATTGAGAGGGTTTCTGGGCTGACGTTCAATGTCGATTTTTTTGCAGGCTATTCGCCGGAGCGTATTAACCCCGGTGATAAGGAACACACGCTTGCTACGATCAAGAAGGTCACGTCGGGTTCTACGCCGGAAGTGGCAGATTTTGTCGATGCCTTGTATCGGCGAGTGATTACGGCAGGAACACACCAAGCCAGCAGCATCAAAGTGGCAGAAGCAGCCAAGGTCATTGAAAACACCCAACGGGATTTGAATATTGCGCTGATCAACGAATTGGCGGTTATTTTTAACCGCATGGGGATTGATACCGAAGCCGTCTTGCAAGCAGCGGGAACCAAGTGGAATTTTCTGCCATTTCGCCCCGGTCTGGTTGGTGGACATTGCATCGGGGTTGACCCTTATTACCTGACGCATAAAGCGCAAGCATTGGGCTACCATCCCGAAGTGATTTTGGCGGGGCGGCGCATCAATGACAGCATGGGGGCGTATGTGGCGGCGCAGCTTATCAAGGCAATGGTGAAAAAACGTATTCAGGTGGAAGGTGCGAAAATTCTGGTGATGGGGCTGACCTTTAAGGAAAACTGCCCAGATTTACGGAATACGCGGGTGGTGGATATTCTCAAAGAATTGTGTGAATACCATATTCAAGCGGATGTATGTGACCCGTGGGTGAGAGAAGCCGAGGCACAACAGGAATACAAGTTACGTTTGGTTGCTGAACCCAAAAGTGATTACTACGATGCTGTCATTGTGGCGGTGGCACATCAGCAGTTTCGGGACATGGGCATTGGGGCTATCCGCGCATTGGGTAAGCCGTTACATGTTTTGTATGATTTGAAGTACCTGTTCCCCGCAGATGCGACGGATTTGAGGCTATAA
PROTEIN sequence
Length: 428
MFFQRNDNIVLSIIGLGYVGLPLAVAFGKHFSTIGFDTNPARIAELQNGYDHTMEVASAAFCEAKHLQFTSELEALQAANVFIVTVPTPIDVHKSPDLTPLLKASESVGMVIKRGDVVIYESTVYPGATEEDCIPVIERVSGLTFNVDFFAGYSPERINPGDKEHTLATIKKVTSGSTPEVADFVDALYRRVITAGTHQASSIKVAEAAKVIENTQRDLNIALINELAVIFNRMGIDTEAVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQALGYHPEVILAGRRINDSMGAYVAAQLIKAMVKKRIQVEGAKILVMGLTFKENCPDLRNTRVVDILKELCEYHIQADVCDPWVREAEAQQEYKLRLVAEPKSDYYDAVIVAVAHQQFRDMGIGAIRALGKPLHVLYDLKYLFPADATDLRL*