ggKbase home page

ar4r2_scaffold_4827_10

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(5966..8062)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 705.0
  • Bit_score: 836
  • Evalue 2.30e-239
DNA helicase/exodeoxyribonuclease V, beta subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPK8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 705.0
  • Bit_score: 836
  • Evalue 1.60e-239
  • rbh
exodeoxyribonuclease V subunit beta similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 713.0
  • Bit_score: 406
  • Evalue 1.50e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2097
CCAACCCACGCTTTTTTTGACGCGCTGGATGTGTTGCATGAAGCACATTCCGGGTTGCAAGCCTTGTTGCCGGGTGCGCTGGAGCATTTGCGGGTGCAATTGTTGCACTATTTACGGCACGAATTACCGTTGCGCAAACAGCAGCGCGGTTTATTGACCTTCGATGATTTATTGCTGCAATTGGAGCAGGCGTTAACCCGTCACCCCGGTTTTGCACAACGTTTGGCGGCGCAATACCAAGCCGCGTTGATTGATGAGTTTCAGGATACTGACCCGATTCAGTACGCGATTTTTGGGTGCATTTACCCGCCGTCTGCCGCCGAGCAGCCGCAACGGGTGTTTTACGTGGGCGATCCTAAACAGGCGATTTACGGGTTTCGCGGGGCGGATATTCACACCTATTTGCAGGCTGCGCATCACGCACAACAGCGTTATACCTTGGGGCAAAACTTTCGGTCGCACGCGGATTTACTGGCGGCTCTTAACCATTTGTTTGGGCAATCGAGTAATCCGTTTCGCGGTGAAATTGCTTATGAAGAAGTGGTTGCGGGTAAGGATCAGGCTGCTATTTTTTTACCTGCTGCCGACGAAGAAACCCCGCTGCCGCCGTTGCGCTTGTGGGAGTGGGATGTGCCTGAGGAGCATCGTGGCAGCGATGTGGAAGACGCGCTGGCGGCGGCGACTGCTGATGATATTGCACGGTTGTTGAACGCGGGGCAGCAAGGGCAGGCGGTGATTGGCGATAAGCCGTTGCGTAGCGGTGATATTGCGGTATTAGTGCGCACCAGTAGGCAAGGTGAACGGGTGCGTAACGCGCTGTTGGAGCGTGGTATTGCCAGCGTGCAACGTTCCCGCGATAGCATTTTCAGCACTCGCGAAGCCAGCGAATGGCGGGCGGTGTTACGTGCGATTGCCGAACCGGGTAATGAGGCGGCATTAAAACAGGCACTGATCACCGAGTTATTTGGTTACAGTGCGGAACAATTACACGCACTGGAGCAGCAGCCCGCGTTACTGGAAAGCGCACTCGAAGCCTTTCACGATTGGCATAAAATCTGGAAAACCCAGGGTTTTATGCCGATGTTCCGGCGTTGGTTACGTCAGCAACAGCGCGATCAGTATTTGCTGGGATTTGTCGATGGCGAGCGGCGGTTAACCAATTTATTGCACCTTGCGGAATTAATTCACACCGAAACCCGGCTGCATGGGCACGGAATGCACGCGCTGATTCGCTGGTTACAGCAAAAAGCCGAGGCAGCCGAAGCCGAGGAAACCCACCAGTTACGCCTCGAAAGTGATGCGGAATTGGTGCAAATTGTCACTATTCACAAAAGCAAGGGTTTGGAATACGCGGTGGTGTACTGCCCGTATTTATGGCAGGAACGCGAGCCGAGTAAACACGCTTGGTTCAGTTGGTATGACACCACGCAAGGGGAGGGCGTGCCGTGTTTGCAGGCGGATTCCCTCGCCACCGATGCGCAACGTCAGCAACGTTGGGAAGAAGAAAAAGCTGAAAATTTACGCTTACTCTACGTGGCGTTGACCCGTGCTAAATACCATTGCACCTTGGCGGTGGTGACGGGGACAGTGAGTCGGTTTGACTATTATTCCGCCTTGGGTTGGTTATTGTTTGGGGATTTGCCGCAGCAAGCCGCAATCCTTGGCAAAGCTACTAAAGACAAGATGCAAGCCCCCGAACGTCAAGCGTTAATGCAAGCGCAATTACAAGCGATCGTCAGTACTTCGCAGAACACCATCGGTTTGGAAAGCGTGCCGTTGATTAGCGAATTGCGGCGTTATTGCCCGCCGGTGGTGAACACGGAGCCGCCAATAGCACCACCACCGTTGCGTTTACGTGCGACGTTAAAGGTGGGCAGTTTCAGCGGTTTAGTGGCGGGGAAGGACGATGAAAAGCCCGATTACGACAGTTTGGCGTTGCTGAATACCAGCACCTTGGGGCGTGACAGCGGGCGTGGTGATGTGTTTCCTCGCGGGGCGCAGGCGGGAAGTTGTTTGCATAAGATGCTGGAGGAACTGGATTTTATGCAAAGCGTAGCGGCGCAACGTGATAGCGTGTTATTGCCTGCACGCCGTTAA
PROTEIN sequence
Length: 699
PTHAFFDALDVLHEAHSGLQALLPGALEHLRVQLLHYLRHELPLRKQQRGLLTFDDLLLQLEQALTRHPGFAQRLAAQYQAALIDEFQDTDPIQYAIFGCIYPPSAAEQPQRVFYVGDPKQAIYGFRGADIHTYLQAAHHAQQRYTLGQNFRSHADLLAALNHLFGQSSNPFRGEIAYEEVVAGKDQAAIFLPAADEETPLPPLRLWEWDVPEEHRGSDVEDALAAATADDIARLLNAGQQGQAVIGDKPLRSGDIAVLVRTSRQGERVRNALLERGIASVQRSRDSIFSTREASEWRAVLRAIAEPGNEAALKQALITELFGYSAEQLHALEQQPALLESALEAFHDWHKIWKTQGFMPMFRRWLRQQQRDQYLLGFVDGERRLTNLLHLAELIHTETRLHGHGMHALIRWLQQKAEAAEAEETHQLRLESDAELVQIVTIHKSKGLEYAVVYCPYLWQEREPSKHAWFSWYDTTQGEGVPCLQADSLATDAQRQQRWEEEKAENLRLLYVALTRAKYHCTLAVVTGTVSRFDYYSALGWLLFGDLPQQAAILGKATKDKMQAPERQALMQAQLQAIVSTSQNTIGLESVPLISELRRYCPPVVNTEPPIAPPPLRLRATLKVGSFSGLVAGKDDEKPDYDSLALLNTSTLGRDSGRGDVFPRGAQAGSCLHKMLEELDFMQSVAAQRDSVLLPARR*