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ar4r2_scaffold_5376_7

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 3861..4457

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion apparatus lipoprotein, YscJ/HrcJ family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWM8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 195.0
  • Bit_score: 287
  • Evalue 1.40e-74
Type III secretion apparatus lipoprotein, YscJ/HrcJ family {ECO:0000313|EMBL:EIJ35771.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix. similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 195.0
  • Bit_score: 287
  • Evalue 1.90e-74
type III secretory pathway, lipoprotein EscJ similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 189.0
  • Bit_score: 188
  • Evalue 1.80e-45

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGATAACTAAAAAAAGCTATTCAACGGGTTTTTTGCTCGTTTTACTGTTATTAAGTGGTTGTAAAACTGAGCTTTACAGTAAATTAGACGAAAGTGACGCTAACGCCATGTTGGCGATTTTACTCAACAATAATATCAGTGCGGAAAAGCTTGCGGATAAAAAAGCAGGCACGTATTTTTTGCACGTTGATGATGCACGTATCCCGCAGGCCGTGGGTTTATTGCGCGATCACGGTTATCCCAAAGAAAAATCCGTGAGCATGGGCGAAATGTTTAAAAAGGAAGGCTTGATTTCTTCACCATTGGAGGAACGCGCCCGTTTTATTTTTGCTCTATCTCAAAGTGTTCAAGAAACTCTCAGTCAAATTGATGGTGTGTTAATCGCGCGGGTACACGTGGTTATGCCGGAAAAGTTCTCAGCGAATGAAGCACCAAAACCGTCTTCAGCTTCGGTATTTATTAAATACAATCCCGCTTATCGCATCGAAGACATGCGCTCTGAAATTAAAATGATTGTTGAGAAAAGTATCGAAGGTTTGAGTTACGATAAGGTGTCAGTGGTGATGGTTCCGGCGCAATTGCCTGCCACTCAGTAA
PROTEIN sequence
Length: 199
MITKKSYSTGFLLVLLLLSGCKTELYSKLDESDANAMLAILLNNNISAEKLADKKAGTYFLHVDDARIPQAVGLLRDHGYPKEKSVSMGEMFKKEGLISSPLEERARFIFALSQSVQETLSQIDGVLIARVHVVMPEKFSANEAPKPSSASVFIKYNPAYRIEDMRSEIKMIVEKSIEGLSYDKVSVVMVPAQLPATQ*