ggKbase home page

ar4r2_scaffold_5451_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 956..1348

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=870187 species="Bacteria; Proteobacteria; Gammapr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 125.0
  • Bit_score: 208
  • Evalue 4.30e-51
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 118.0
  • Bit_score: 129
  • Evalue 6.70e-28
Shikimate kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRI6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 125.0
  • Bit_score: 208
  • Evalue 3.10e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
TTGATTCCCGCGGCGGGCTTCCGTGAGCGCGAGGAGCAGATCATTGCCGAATTGACCGCAATGCCCAACATTTTGTTGGCTACCGGCGGCGGCAGCGTCTTGCGTGAAACCAATCGCCAGCATATTAAAGAAGGCGGTTGCGTCATCTATTTACGTGCCAGTGCTGAGCATTTGTTTCAGCGCATCAAGCACGATCGCAGCCGTCCCTTGATGCAAACCAGTCACCCGTTACAGACGTTACGCGATTTGCTGAAAATGCGTGACCCTTTGTATCTGGAAGTTGCCGATTTAATCGTGCCAACCGGTAAGCAAAAAGTGAACGTTATTTTGCGCGATATTTACACCAAACTAAAACAGTTACAGGAAGTTTCCCATGCAAACCCTCCAGCTTGA
PROTEIN sequence
Length: 131
LIPAAGFREREEQIIAELTAMPNILLATGGGSVLRETNRQHIKEGGCVIYLRASAEHLFQRIKHDRSRPLMQTSHPLQTLRDLLKMRDPLYLEVADLIVPTGKQKVNVILRDIYTKLKQLQEVSHANPPA*