ggKbase home page

ar4r2_scaffold_10014_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1775..2686)

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 297.0
  • Bit_score: 239
  • Evalue 1.10e-60
Cell wall hydrolase/autolysin n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTX8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 316.0
  • Bit_score: 389
  • Evalue 2.30e-105
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EIJ34821.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 316.0
  • Bit_score: 391
  • Evalue 1.40e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GTGGTCTTGGATGTTGCTGAAAACGTGAGTGTAAAAGCCGCAATGCAGGCCAAGGGTAGCCAAAACACCTTACAAATTAGCATTCAAGGTTCCGGTAATGTGCCGCCACCGCCGCCGAAAAGCGAGCCTGCGGTTGAAAAGAAAAAGGTTGCAGCCCCACCAGAAGCCGTTCCTGAAAAAAAATCCAGAGACAAACCTGTCACTTCGGAACCGCCACGCAGTAAATTTATCGTGGTAATTAAAGATCCCGGTGCGGTTGGCAGTAACGGTACACGCGAAAAAGACGTAGTGCTGGAAGTGGCACGTAAACTCAAAACCCGCATCAATCAAGAAAAGGGCATGAAAGCCGTATTAACCCGCGACAGCGATAGCTTTATCCCGCTGCGCCAGCGCATGGAATTTGCCCATCAGCAAAAAGCCGATTTATTCATTTCGGTACACGCAGATGCCAACCCCAATGCGCGTGTCAACGGTTCTTCGGTCTATATTCTGTCCGAAACGGGCGCGTCCAGCGAAGCTGCACACTTACTGGCAGAAAGCGAAAACTCTTACGAACTCAAATTTGGGGAACACCGCCTGCAAGACACCAATACCCGTCTTGCTTCCGTGCTGCTGGATTTGAGCCAAAGCGCGATGATGGAACGCAGTTTAGATCTTGCTAAAGGGGTGTTAAGCGAACTTTCCAAGGTCAATAACCCATTGCGTCGTCGGGTTGAAAGTGCGCGTTTCGTGGTGCTACGTTCCCCCGAAATTCCTTCGATGTTGGTGGAAACCGCGTTTATCAGTAACCCCACCGAAGAACGCCGCTTACGCACTGCCGAATACCAGCAAAAACTGGCGGCGGCGATGTTTAAGGGGGTGAAACGCTATCACCTTGCTTACAGCGCGAACCGCAACCGCGCTAACGCTTAA
PROTEIN sequence
Length: 304
VVLDVAENVSVKAAMQAKGSQNTLQISIQGSGNVPPPPPKSEPAVEKKKVAAPPEAVPEKKSRDKPVTSEPPRSKFIVVIKDPGAVGSNGTREKDVVLEVARKLKTRINQEKGMKAVLTRDSDSFIPLRQRMEFAHQQKADLFISVHADANPNARVNGSSVYILSETGASSEAAHLLAESENSYELKFGEHRLQDTNTRLASVLLDLSQSAMMERSLDLAKGVLSELSKVNNPLRRRVESARFVVLRSPEIPSMLVETAFISNPTEERRLRTAEYQQKLAAAMFKGVKRYHLAYSANRNRANA*