ggKbase home page

ar4r2_scaffold_7754_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 1323..2585

Top 3 Functional Annotations

Value Algorithm Source
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNE9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 399.0
  • Bit_score: 652
  • Evalue 3.40e-184
  • rbh
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:EIJ32892.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 399.0
  • Bit_score: 652
  • Evalue 4.70e-184
(NiFe) hydrogenase maturation protein HypF similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 397.0
  • Bit_score: 443
  • Evalue 8.80e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGATTGCCCAGCGGATTCGTATCAGCGGTCTCGTTCAAGGTGTCGGTTTCCGCCCGAATGTGTGGCGATTGGCGCGGGCGTACGGTATCGCTGGCACGGTGCGTAATGACAGCAGCGGCGTATTGATCGAAGCGTGGGGCAATGCGCCCGCACTGGCAGATTTTCAACAGCAATTGCGTAGCGACATTCCGCCGCTGGCGCGTATCGAACACCTACAGATTACGGCGTTGGAGGCTGCTTGCCCGCATTCTGATTTTCGCATTATTGCCAGTGAATCCGGTGAAATTCATACCAACATCGTGGCAGATGCGGCGATGTGTGCCGCTTGCCGTGCTGATATTTTTGACGTAAACAATCGCCGTTATCGTTACCCGTTTACCAATTGCACCCACTGCGGGCCGCGTTTGAGCATTGTGCGCACCATTCCCTATGACCGTGCAAATACCAGCATGGTGGGGTTTGCGCAATGTCCGGATTGTTTACGCGAATACACCGATCCTGCCGACCGGCGTTTTCATGCGCAACCGAATGCCTGCCCGATTTGTGGCCCGCAACTGTGGTTGGAAACGATGAACGGACAAGCCATTACCCCTGATTTTGGTGAACGTGATTGCCTTGACACCGCTAACCGCTTGTTGCGCGAAGGCCATATTCTCGCCCTAATGGGCTTGGGTGGGGTGCATTTGGTGTGTGATGCCAGCAATGCAACGGCGGTGGCAAATTTGCGGCAGCGTAAACGCCGTTATCAGAAACCGTTGGCGTTGATGGCACGGGATTTGGCGGTAGTGCGGCACTACTGTCATGTCAGTGCGGAAGAAGCCACCTTGCTACAAAGCCAATACGCGCCGATTGTGTTGCTGGAAGAAACCCCTCCTAACCTCCCCTTATCAGGGGAGGGACAAGAAGAGCGGAGTACAGTTTCGCTCCCTTCCCTGATGATAAGGGGAGGGCTGGGGAGGGGTTTCTTTCTCGGTTTTATGCTCCCTTACACCCCGCTCCACGCACTGCTGCTGGAGCCGTGGGATACGCCGCTGGTGATGACCAGTGCTAATCTCAGCGAAGAACCGCAGTGCATAACGCTCGATGAAACGCGCCAGCGGATGCAGGGCATTGCCGACTATTTGCTGTTACACAATCGCCCGATTGTTAACCGCGTGGATGATTCTGTTGCGCGGATTCTGGGCGGTAAGCTACGCACCAGAACCCATCCATTTACCGACGGGCTTTACGGATGTGCCGCCACTGCTCGCGATGGGTGGTGA
PROTEIN sequence
Length: 421
MIAQRIRISGLVQGVGFRPNVWRLARAYGIAGTVRNDSSGVLIEAWGNAPALADFQQQLRSDIPPLARIEHLQITALEAACPHSDFRIIASESGEIHTNIVADAAMCAACRADIFDVNNRRYRYPFTNCTHCGPRLSIVRTIPYDRANTSMVGFAQCPDCLREYTDPADRRFHAQPNACPICGPQLWLETMNGQAITPDFGERDCLDTANRLLREGHILALMGLGGVHLVCDASNATAVANLRQRKRRYQKPLALMARDLAVVRHYCHVSAEEATLLQSQYAPIVLLEETPPNLPLSGEGQEERSTVSLPSLMIRGGLGRGFFLGFMLPYTPLHALLLEPWDTPLVMTSANLSEEPQCITLDETRQRMQGIADYLLLHNRPIVNRVDDSVARILGGKLRTRTHPFTDGLYGCAATARDGW*