ggKbase home page

ar4r2_scaffold_7845_7

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3393..3782)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 81.0
  • Bit_score: 150
  • Evalue 1.40e-33
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZ65_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 81.0
  • Bit_score: 150
  • Evalue 9.90e-34
2-dehydro-3-deoxyphosphooctonate aldolase similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 82.0
  • Bit_score: 128
  • Evalue 1.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGAAACTGTGTGGATTTGAGGTTGGTCTTGAGCAGCCGTTTTTCCTGATTTGCGGGCCGTGTGCGATTGAAACTGAACAGTTGGCACTGGAAACCGCGAGTAAACTGAAAGAAATCACTACCCGCTTGGGGATTCCGTTCATTTACAAATCGTCTTTTGACAAGGCTAACCGTTCCTCACATAACAGTGCCCGTGGCGTTGGTTTGGAAGCCGGATTGCGCATTCTGGAAAAAGTGAAAAACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGGGATATGGGCAATGTGGTTGAAAAAGCCCGTGCTACCGGCAACCAGCAAATCATGGTGTGCGAACGCGGTTATGCTTTTGGTTACAATAATTTAG
PROTEIN sequence
Length: 130
MKLCGFEVGLEQPFFLICGPCAIETEQLALETASKLKEITTRLGIPFIYKSSFDKANRSSHNSARGVGLEAGLRILEKVKNXXXXXXXXXXXXXXXXRGIWAMWLKKPVLPATSKSWCANAVMLLVTII*