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ar4r2_scaffold_11234_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 1..2046

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=870187 species similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 654.0
  • Bit_score: 967
  • Evalue 1.40e-278
ATP-dependent RNA helicase DeaD n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSC9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 654.0
  • Bit_score: 967
  • Evalue 1.00e-278
  • rbh
deaD; Cold-shock DEAD box protein A-like protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 584.0
  • Bit_score: 758
  • Evalue 1.50e-216

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2046
CGACTATCCGACCACTATCCAGAAATAAAGGTTTATCTAAATCGCCAACTACCGCATAATGCCCGGTTTCCTCTTGACTTTATGCGTCCCATGTCCCCAGAAATAAATACTTCCCCCATTTTCGCCGATTTCGGCCTCGCCGCCCCTGTCCTGCAAGCAGTTCAAGACCTCGGCTATGAAACACCTTCAGCTATTCAGGCTGAAACCATTCCTTATTTGCTGGAGGGGCGCGACGTATTAGGTCAAGCGCAAACCGGCACCGGCAAAACTGCCGCTTTCGCCCTGCCGTTGCTCTCACGTTTGGACATGAGCAAAACCGGGCCACAAATTCTGGTGCTTGCTCCAACCCGCGAACTCGCGATTCAGGTGGCTGAAGCGTTCCAGAAATACGCGGGTAAGCTCCCCGGTTTCCACGTTATGCCGATTTACGGCGGGCAAGATTACCGCACCCAATTCCGTCAACTGGAACGCGGTGTGCAAGTCGTCGTTGGTACACCGGGGCGCGTGATGGATCACCTGCGTCGTGGTTCACTGAAACTCGATGGTTTACAAGCTTTGGTGCTGGACGAAGCCGATGAAATGTTGCGCATGGGCTTCATCGAAGACATCGAATGGATCATGGAGCAAACCCCGCCAACCCGTCAAATCGCGTTGTTCTCGGCGACTATGCCGCCTGCGATTCACCGCATTGCGCAGAGTTATCTGACCAACCCGGCGGAAGTCAAAATCAAGGTCAAAACCACGACGGCGGACACTATTCGTCAGCGTTATTGGTTAGTCAGCGGCTTGCACAAGTTGGACGCACTTACCCGCATCCTCGAAGCTGAGCCATTTGATGCTGTGATTATTTTCGTGCGCACCAAAACGGAAACCGTGGAGCTGGCTGATCGCCTGCAAGCGCGTGGTTACAGTGCGGTCGCGCTCAATGGTGATATTCCGCAGAATGTGCGTGAACGTACCATTGATCAGTTGAAGAAAGGCAAAATCGACATCCTGATCGCTACCGACGTTGCTGCGCGTGGTTTGGATGTGGAACGCATTAGCCACGTTATTAACTACGATATTCCGACGGATACCGAATCCTACGTCCACCGTATCGGGCGTACCGGGCGTGCAGGGCGTAGTGGTGATGCGATTTTGTTCGTGTCCCCGCGTGAACGTCATTTGCTGCGTGCGATTGAACGTGCTACCCGTAAACCGATTGACTTGATGGAATTACCTTCCACCGAGATTATCAATAATCGGCGGATTTCACTGTTCAATCAACGTATTACCGATACCTTGGCAGAAGAGGATTTGGATTTCTTCTCGCAACTGTTGGAAGCTTATGAGCGCGAACACAATGTTCCTGCGATTGAGATTGCCGCAGCACTGGCGAAACTGGTGCAAGGCGATGCGCCGTTGTTGCTTGAAGAGAAGAAAAATCACCCGGCTTACAACCCGGATTCCGCGCGTGAACGTGAGCAAGATCAGCGTAAACCGGGTAAGCGTAAAGCCAATTCGGCCTTTAGCAGCGATGAAGAAACCATTCCAATGGAACGTTTCCGTATTGCTGTCGGGCGCACTCACGGGGTGAAACCGGGCAATATCGTTGGTGCGATTGCGAATGAAGCGGGCTTAGATAGCCGTTACATTGGGCATATCGACATTCAGGACAATTTTAGCTTGGTGGATTTGCCAGCAGGAATGCCGAAAGACATTCTGGGCGATTTGCGCCGCACGCGCGTTGCAGGGCAAATGCTCAATATTGAACCGGCGGGTGAATCGGCTGCGGATTATTCACCAAGCCGTACCAGCGGTGGTGGTGGTGGCGGTCGTCGTCCAGAACGTGATGGTGGCGGGCGTGGTCGTTCGTTCGGTGGTGGTAGCGGTTCCGCGCCGCCGCGTCGTCGTGAAGCAGGTAAAACGGGTGAACGCCCGGATCGCCGTCCTCGTGCTGAAAAATCTGCTGGCGGTGAGCGTCCACCTAGTCGTCCGAAACCGTCTACGATTAGCAGAAAACCTACGTCTGATAAAGACAAGGGTAAGCCGAAGCGTAACGATTGA
PROTEIN sequence
Length: 682
RLSDHYPEIKVYLNRQLPHNARFPLDFMRPMSPEINTSPIFADFGLAAPVLQAVQDLGYETPSAIQAETIPYLLEGRDVLGQAQTGTGKTAAFALPLLSRLDMSKTGPQILVLAPTRELAIQVAEAFQKYAGKLPGFHVMPIYGGQDYRTQFRQLERGVQVVVGTPGRVMDHLRRGSLKLDGLQALVLDEADEMLRMGFIEDIEWIMEQTPPTRQIALFSATMPPAIHRIAQSYLTNPAEVKIKVKTTTADTIRQRYWLVSGLHKLDALTRILEAEPFDAVIIFVRTKTETVELADRLQARGYSAVALNGDIPQNVRERTIDQLKKGKIDILIATDVAARGLDVERISHVINYDIPTDTESYVHRIGRTGRAGRSGDAILFVSPRERHLLRAIERATRKPIDLMELPSTEIINNRRISLFNQRITDTLAEEDLDFFSQLLEAYEREHNVPAIEIAAALAKLVQGDAPLLLEEKKNHPAYNPDSAREREQDQRKPGKRKANSAFSSDEETIPMERFRIAVGRTHGVKPGNIVGAIANEAGLDSRYIGHIDIQDNFSLVDLPAGMPKDILGDLRRTRVAGQMLNIEPAGESAADYSPSRTSGGGGGGRRPERDGGGRGRSFGGGSGSAPPRRREAGKTGERPDRRPRAEKSAGGERPPSRPKPSTISRKPTSDKDKGKPKRND*