ggKbase home page

ar4r2_scaffold_25566_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3..812)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Thiothrix disciformis RepID=UPI0003800C44 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 268.0
  • Bit_score: 295
  • Evalue 5.20e-77
phage integrase family protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 264.0
  • Bit_score: 247
  • Evalue 1.70e-62
Integrase similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 271.0
  • Bit_score: 234
  • Evalue 4.00e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGGCGCGTGACTCGCATTTGCGCACCTTGCAAAGTATTGGGCAAATCTTGCGCTATGCGATTGCAACCGGACGGCGTGAGGATGCAGACCCGACACCCAGCCTAAAGGGATTGTTCCCACCCAGCGAACCCGAAAGCCATTTCCCGGCGATTACCGACCCGGTGGAAGTAGGGCGGTTAATGAGGGCGATAGATCACTATCAGGGCAATATGATTACCAAGGCGGCCTTAGAGTTATCATCTATGGTGATGATGCGACCGGGCGCACTGATCAAAGCAGAATGGGCTGAAATAGATTTTGAAGCGGCAATCTGGACTATTGAGGCCAACCGCATGAAAAACCCCATGATGGTTAAGAAGGCCAACCGCGAAACCGATAGACACCTAATCCCGCTACCTACGCAAGCGGTAGAAGTGCTTAAGGGGTTGTTGCCACTTACCGGACATACCCGCTACGTGTTTCTATCGCCAGCTACCCGCAGCAAAAAACATGGCGAACATCACAAGCCCATGTCAACCGAAACCGTCACTAAGGCGGTTTGTCGCATGGGGTTCAAGGGTGAAATGTGTGGGCATGGATTTCGCTCTACTGCAAGCACCTTGCTAAACGATATGCGCAGGCCGGACGGGTCAAGAATGTGGGACTCTGACGCAATTGAACGGCAATTAAGCCACAAAGACCGCAACTCGATTAGAGCCGCATACAACCGTGGGGAATACATCGAAGAACGGCGGCGCATGTTGCAATGGTGGGCGGATTACCTCGACCGGCTGAAAGAGGGCGGTCAAGTAATCCCGTTTCGGCACATT
PROTEIN sequence
Length: 270
VARDSHLRTLQSIGQILRYAIATGRREDADPTPSLKGLFPPSEPESHFPAITDPVEVGRLMRAIDHYQGNMITKAALELSSMVMMRPGALIKAEWAEIDFEAAIWTIEANRMKNPMMVKKANRETDRHLIPLPTQAVEVLKGLLPLTGHTRYVFLSPATRSKKHGEHHKPMSTETVTKAVCRMGFKGEMCGHGFRSTASTLLNDMRRPDGSRMWDSDAIERQLSHKDRNSIRAAYNRGEYIEERRRMLQWWADYLDRLKEGGQVIPFRHI