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ar4r2_scaffold_51578_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 2..706

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN68_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 228.0
  • Bit_score: 305
  • Evalue 4.30e-80
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiot similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 228.0
  • Bit_score: 305
  • Evalue 6.10e-80
organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 244.0
  • Bit_score: 182
  • Evalue 1.60e-43

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
CGCCATAGCGAATACACCTTAGACGATGCCAACAAAACCCGTGTGAGTCGCACCTTACCAACCGCCACCGTAGATGCTGGATTGTTTTTTGAACGCGAAGTCAAGCAAGGTAAGTATTTACAAACGCTGGAACCGCGTCTGTATTACACCCAAACCCCGTACAAAGATCAAAGCAACATTCCGGTGTTCGATTCTTCCGAAAACACCTTTAGCTACGGGCAATTGTTTAGCGAAAATCGTTTTACCGGGAAAGACCGCATTGAAGATGCCAATCGCCTATCAGCGTCCGTCACCACCCGTTTTCAAGATCAAAAAAGCGGTCGCGAAGTGCTGCGAGCCAGCGTCGGACAAATCTACCACTTTGATGAGCGCAAAGTGACCTTACCGGGTCAAACTGCACAAACGGGCAAACGCTCCGAGATCGTATTTGAAACCGGCGGACAACTTAACCCGCGCACCAATCTCAGCAGCACCACATTTTGGGATAGTGACACTAAAAAGCTGACCGCCAACCAAGTGGATTTACGTTACAAGGACGATAAAAAGCGCATTGTTAACATCGGTTACACCAAGCGTAAAGACGAATTTGAAGCAGGTCGTCTATCCTTCGTTGCTCCGGTAAAAGAGAATTGGAAAGCCATCGGTGGCGTGGAATACGACTTACTTAACAATCGCACATTGGAATATTCATTGAATTTGAATTAA
PROTEIN sequence
Length: 235
RHSEYTLDDANKTRVSRTLPTATVDAGLFFEREVKQGKYLQTLEPRLYYTQTPYKDQSNIPVFDSSENTFSYGQLFSENRFTGKDRIEDANRLSASVTTRFQDQKSGREVLRASVGQIYHFDERKVTLPGQTAQTGKRSEIVFETGGQLNPRTNLSSTTFWDSDTKKLTANQVDLRYKDDKKRIVNIGYTKRKDEFEAGRLSFVAPVKENWKAIGGVEYDLLNNRTLEYSLNLN*