ggKbase home page

ar4r2_scaffold_58940_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(530..1162)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=870187 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 198.0
  • Bit_score: 287
  • Evalue 1.50e-74
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 198.0
  • Bit_score: 287
  • Evalue 1.10e-74
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 184.0
  • Bit_score: 173
  • Evalue 6.50e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
CGGGCGCAAGTCGAAGGCGATTTGACCCGCAGCCGCATTTACGAAGGCGTGAGTCAGGGCAAGCTGCCAGCGGGGATTGAATATTACTTGCCGCTGTTCTTTGAGCATACCGCGACGTTGTTTGATTATTTGCCGAAGAAAACGCTGCTGGTATTGGCGGAAGGGGTTGATGCTGCCGTCAAAACGTTCTGGGAAACGGTGGAATATCGGTATGAGCAGCGGCGGCATGATATTGAAAGGCCGTTGCTTGCGCCGGAGAAGTTGTTTTTGACGGCGGCGATGTTGGGGAGTTGGGTTGGGGATTATCCACGAGTTGAGGTACAGCGGTTTAAACACGAAACCGAAGGGCTGAACTACCCCATCGCCGCCCTCCCCTCGCTGCTCATTCACGCCCGCCAAGAACAGCCCCTGTTCCTGCTGTTCAATTTCCTCAAAGACCTGAAAGGCCGCGTGCTATTCACCGCCGAATCTGCCGGGCGGCGCGAAGCCTTCCTCACCCTGCTGAAAGACAACGGCATCGCGGTCAAAACGCTGGAAACCTGGCAGGATNNNTCGCCGCAAAGCCACCCGCGATGCCGATGCGATTATCCGCAACCTCACCGACCTTTCCGAAGGTGCGCCCGTGGTGCATGA
PROTEIN sequence
Length: 211
RAQVEGDLTRSRIYEGVSQGKLPAGIEYYLPLFFEHTATLFDYLPKKTLLVLAEGVDAAVKTFWETVEYRYEQRRHDIERPLLAPEKLFLTAAMLGSWVGDYPRVEVQRFKHETEGLNYPIAALPSLLIHARQEQPLFLLFNFLKDLKGRVLFTAESAGRREAFLTLLKDNGIAVKTLETWQDXSPQSHPRCRCDYPQPHRPFRRCARGA*