ggKbase home page

ar4r2_scaffold_29408_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(463..1107)

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction enzyme, S subunit n=1 Tax=Pseudoalteromonas sp. BSi20439 RepID=G7FDV5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 206.0
  • Bit_score: 243
  • Evalue 2.40e-61
Uncharacterized protein {ECO:0000313|EMBL:KDC52573.1}; TaxID=43655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 236
  • Evalue 4.10e-59
restriction endonuclease S subunit similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 201.0
  • Bit_score: 193
  • Evalue 8.10e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoalteromonas citrea → Pseudoalteromonas → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
CGTCAAGCCTTGGGTGATGCGCGTAAGCCACTGCCGGAGGACATCCGCTCGCTGTTCCCGAATGCGTTTGTGTTCACGGAGGAAATGGGGTGGATACCGGAGGGGTGGGAGGTTGTTAAACTGCAAGAACTCTTGGACATCAAATACGGAAAAGATCACAAGAAATTAGGTGATGGAGATATTCCCGTCTATGGTTCTGGTGGCATCATGCGTTTTGCAGACAAGGCTCTGCATCAAGGTGAATCCATTTTAATTCCCCGCAAAGGGACATTAAGCAATCTCATGTATGTGAATGAAGAATTTTGGACGGTTGATACCATGTTTTACTCTGTTCCAAAATCGCCTATTTTGGCCAAATATTTGTTTTATTATCTCAAGACGTTTGATTTTAATTCGATGAACGTAGGGTCTGCTGTTCCCAGTATGACGACAAAAGTATTAAATGATCTCAATACGCCAAATCCAGATGCCAAAGTTTTAACGGCTTTCGATCAGTTATTATCGGATTTCTTCGACAAGATGAAGTCAATTAATAATAAAAGTAAAAGCCTCACCCAATTACGGGATACGTTGTTGCCGAAGTTGTTGTCGGGTGAGTTGCGGATTCCAGAGGCGGATCAATTAATTAAGGAGGCATTAGCATGA
PROTEIN sequence
Length: 215
RQALGDARKPLPEDIRSLFPNAFVFTEEMGWIPEGWEVVKLQELLDIKYGKDHKKLGDGDIPVYGSGGIMRFADKALHQGESILIPRKGTLSNLMYVNEEFWTVDTMFYSVPKSPILAKYLFYYLKTFDFNSMNVGSAVPSMTTKVLNDLNTPNPDAKVLTAFDQLLSDFFDKMKSINNKSKSLTQLRDTLLPKLLSGELRIPEADQLIKEALA*