ggKbase home page

ar4r2_scaffold_524_3

Organism: ALUMROCK_MS4_Beggiotoa_37_524

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(3475..5481)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=395493 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 712.0
  • Bit_score: 832
  • Evalue 5.30e-238
Ribonuclease E n=1 Tax=Beggiatoa alba B18LD RepID=I3CJD6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 712.0
  • Bit_score: 832
  • Evalue 3.80e-238
  • rbh
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 682.0
  • Bit_score: 827
  • Evalue 2.60e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beggiatoa alba → Beggiatoa → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2007
ATGAAAAGAATATTAATTAACGCCAAGCAACCTGAAGAATTACGGGTTGCCATGGTTGATGGACAGCGATTAGACAACTTTGACATCGAAATCGCCAATCGCAAACAAAGTAAATCAAATATTTACAAAGGTAAAATTACACGTATTGAACCCAGTTTAGAAGCTGCTTTTATTGATTATGGAGCAGAACGGCATGGTTTCTTGCCATTGAAAGATATCGCACGTACTTACTATACCGCTAACGATGGAACAGAAGTGGTTGAAGAAGAGTTTTCGCGGCACAATATCAAAGAAATGCTCAAGGAAGGGCAAGAAATCATCATTCAAGTGGATAAAGAAGAACGCGGTAACAAAGGAGCCGCTTTAACCACTTACATCAGTTTAGCAGGTCGTTATTTAGTCCTCATGCCCAACAATCCCCGTGCAGGCGGTGTTTCACGTCGCATTGAAGGAGATGAACGCAATGAAGCGCGTGAAGTAATGAATTCCCTCATCTTACCAGACAGCATGGGACTCATTTTACGAACGGCTGGCGTTGGTAAATCGGCTGAAGAACTGAAATGGGACTTGGAATATTTATTACAACTGTGGAAAGCAATTGAAGAATCTGCGAATAATCACAAAGCTCCTTTCCTCATTTATCAAGAAAGCAACATTATCATTCGGGCTATTCGCGATTACTTACGTGAAGACATTGGCGAAATCCTAGTTGACGATGAACAAATCTTTGCTGAAGCCAGCGAATTTATTACTCGCGTGATGCCAAGTTACATCGATAAAGTCCATTACTACAGTGACAACGTCCCTTTATTTACCCGTTATCAAATTGAAAGTCAAATAGAATCAGCTTTCCAACGCGAAGTCAAATTACCTTCTGGCGGCGAAATTGTCCTAGATCACACAGAAGCCTTACTTTCCATTGACATCAACTCAGCGCGTTCTACCAAAGGGGGCGATATTGAAGAAACTGCACTCAATACCAATTTAGAAGCAGTAGAAGAAATTGCTCGCCAATTACGATTGCGCGATGTGGGTGGATTAGTAGTTATCGACTTCATCGACATGCTCAGTCATAAAAACCAACGAGAAGTAGAAAACCGACTTAAAGATGCCTTAAAAATGGATCGAGCACGGGTTCAAGTAGGACGTATTTCCCGATTTGGTTTACTAGAAATGTCACGCCAACGTTTACGTCCATCCTTAGGAGAATCCAGCCAAACAGTCTGTCCACGTTGTCGTGGTCAAGGCTCTATTCGCAGCGTAGAATCATTAGCTTTATCGATTTTGCGCTTGATTGAAGAAGAAGCCATGAAAGAAAGGACTATTAAAATCATTACCCAAGCTCCGGTTGAAGTGGCTACTTACCTACTCAACGAAAAACGTCATGCTATTCGTGAAATTGAAATCCGCCAAAAAATCGATGTGGTACTCATTCCTAGTACTTACATGAATACTCCGATGTATGATGTACAACGGGTACGCTTAGATGATAGAACAAATTCAGACAAATTAAGCTACACCTTACCAATGGTTGAATTACAAGAGCAACTGAGTGAGAGTTATTTACATCCCATTAAAGTACCTTCATTAGAAGAACCGGCTGTTAAAGGGATTTCACACACAAATATGGCAGATTTTATTCACAGAAGCGAAGAACAAACGGGTTTATTTTCAAGATTATGGCGGGGACTGTTTGGAGAAAAACATACTAAGGTTGAGCAAAGTGCACTTACCTCTGAGAATAAAGTAGTTCCTACTAAGAATACAGCAAGAACTTCTGGTTCATCAAGGAGGAATACAACTAGCAATGACTCTAATACTGCGAAAAAATCAGACTCCCGTCCTCATGTCAGACGTAGTCGCCGCGGTGGTCGTCGTAAACGTCCAGAAAACACTGCCAATGCTGAAGTCAAAGTACAAGCTACGAAAAGTGAAACCAAGATTCCAGCAGAATCTAATGGAGAAACTAAACCATCTGCTCCAGCAAGCAATAATGAGTTAGATTAA
PROTEIN sequence
Length: 669
MKRILINAKQPEELRVAMVDGQRLDNFDIEIANRKQSKSNIYKGKITRIEPSLEAAFIDYGAERHGFLPLKDIARTYYTANDGTEVVEEEFSRHNIKEMLKEGQEIIIQVDKEERGNKGAALTTYISLAGRYLVLMPNNPRAGGVSRRIEGDERNEAREVMNSLILPDSMGLILRTAGVGKSAEELKWDLEYLLQLWKAIEESANNHKAPFLIYQESNIIIRAIRDYLREDIGEILVDDEQIFAEASEFITRVMPSYIDKVHYYSDNVPLFTRYQIESQIESAFQREVKLPSGGEIVLDHTEALLSIDINSARSTKGGDIEETALNTNLEAVEEIARQLRLRDVGGLVVIDFIDMLSHKNQREVENRLKDALKMDRARVQVGRISRFGLLEMSRQRLRPSLGESSQTVCPRCRGQGSIRSVESLALSILRLIEEEAMKERTIKIITQAPVEVATYLLNEKRHAIREIEIRQKIDVVLIPSTYMNTPMYDVQRVRLDDRTNSDKLSYTLPMVELQEQLSESYLHPIKVPSLEEPAVKGISHTNMADFIHRSEEQTGLFSRLWRGLFGEKHTKVEQSALTSENKVVPTKNTARTSGSSRRNTTSNDSNTAKKSDSRPHVRRSRRGGRRKRPENTANAEVKVQATKSETKIPAESNGETKPSAPASNNELD*