ggKbase home page

ar4r2_scaffold_1313_1

Organism: ALUMROCK_MS4_Beggiotoa_37_524

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 1..2505

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 835.0
  • Bit_score: 1347
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVN7_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 835.0
  • Bit_score: 1293
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 858.0
  • Bit_score: 1312
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beggiatoa alba → Beggiatoa → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2505
ATTACCCATAAACGACGGGTATCTGCCTTAGGCCCTGGTGGTTTGACTCGTGAACGTGCAGGGTTTGAAGTCCGTGACGTTCATCCTACCCATTACGGTCGTGTGTGCCCAATTGAAACGCCTGAAGGTCCAAACATTGGTTTGATTAACTCTCTGGCTGTATATTCACGCACTAATCAATATGGTTTCTTAGAAACACCCTATCGTAAAGTCGATAATGGCAAAGTAACCAATCAAATTGATTATCTATCTGCTATTGAAGAAGGGCGTTACGTGATTGCTCAAGCCAATGCAAATGTAGATGAGCAAGGATATTTTACCGATGATCTGATTGCGGTACGTAATGAAAATGAATTTACCGTAGCGACGCGCGATAAAATTGATTATATGGATGTTTCGCCTAAACAAATTGTTTCAGTAGCAGCTTCATTGATTCCTTTCTTAGAACATGACGATGCTAACCGCGCATTAATGGGTTCGAACATGCAACGGCAAGCAGTCCCTTTATTACGTGCTGAAAAACCCTTAGTGGGTACTGGAATGGAACGCACTGTTGCTGTTGACTCAGGCACTTGCATCGTAGCTAAACGCGGTGGTGTGATTGATTCAGTCGACGCGGCTCGTGTGGTTGTACGCGTCAATGATGAAGAAACTGAACCGGGTGAATCGGGTGTTGATATTTATAATTTCACCAAATATTTACGCTCTAACCAAAATACCAATATTAATCAAAAACCTTTGGTCAATAAAGGTGATATCATTGCTAAAGGTGACGTATTAGCAGATGGTGCATCTACAGACTTAGGCGAATTGGCTTTAGGGCAAAATATGTTGGTCGCCTTCATGCCTTGGAATGGTTATAACTTTGAAGACTCTATCTTAATTTCTGAAAAAGTGGTTCGCGATGATCGTTTTACCTCGATCCACATTGTTGAACTCAGTTGTATGGCGCGGGATACCAAATTAGGACCTGAAGAAATTACTGCTGATATTCCCAATGTCAGTGAATCTGCCTTAAGTAAATTAGATGAAGCGGGCATTGTTTCCATTGGTGCAGAAGTCAGACCCGGTGATATTTTAGTGGGTAAAGTGACCCCCAAAGGTGAAACCCAATTAACACCGGAAGAAAAATTACTACGAGCCATCTTTGGCGAAAAAGCATCTGATGTCAAAGATACTTCTTTACGCGTTCCTTCTGGTACCAATGGTACTGTAATTGATGTTCAAGTCTTTACTCGTGATAGTGTGGCTAAAGATTCTCGTGCTTTACACATTGAACATATGGAATTAAGCAAAGTTCGTAAAGACTTACGAGACAAATTACGGATTGTTGAAGCTGACGTATTCCAACGGTTAGAAAAATTAATTGTTGATGAAGAAGTGATCAGTGCGCCACGTGGTTTATACTCAGGACATAAGATTACTCAAGAGTATCTAAATGATTTGCCCCATGATCAATGGTTTGAAATCAATCTGAAAAAAGTAGAACTGAATGAACAACTAGAATTAGCTCAAGAACAACTGCGTTTAGAAAGAGAACGTTCTGACGATTTGTACGAAGAAAAACGGAAAAAACTCACCAGTGGCGACGATTTGCCACCCGGTGTATTGAAAATGGTTAAAGTCTACTTAGCGGTGAAACGACGCATTCAACCCGGTGATAAAATGGCAGGTCGTCACGGTAACAAAGGGGTTGTTTCTATGATCGTACCTATCGAAGACATGCCTTATACCGCCGATGGTCGTCCTGTGGATATTGTATTAAATCCCTTAGGCGTGCCTTCTCGTATGAACATTGGACAAGTGTTAGAAACACACTTAGGATGGGCTGCTAAAGGTCTAGGTCACCGTATTAACGCAATGCTACAAGCACATGAAACCGCTGTTAATACTATCCGTGACCTTTTAGAAAAAATCTATAATCCGACAGAAGGTGTGGCGGCTGATAACCAACGAGAACAACTTAACCAATTCAGCGATCAAGAAATTTTAGAATTAGCCTATCGTTTACGGGATGGTGTACCTATGGCGACACCAGTCTTTGATGGAGCGACTGAAGAAGAAATTAAAGCCATGTTAGAACTCGCTAGATTACCAACGGCTGGCCAAACCACTTTATATGATGGACGAACTGGGGAAGCTTTTGAAAGACTAGTCACCATCGGCTACATGTATATGTTGAAACTCAATCACTTAGTTGATGACAAGATGCACGCCCGTTCCACAGGTCCTTACAGTTTAGTAACTCAGCAACCGCTAGGTGGTAAAGCCCAATTTGGTGGTCAACGGTTTGGTGAAATGGAAGTATGGGCGTTAGAAGCCTATGGTGCAGCTTATACTTTACAAGAAATGTTGACAGTCAAATCTGACGATGTCAACGGACGTACCAAAATGTATAAAAATATTGTGGACGGCGATCATCGTATGGAAGCAGGAATGCCCGAGTCTTTTAACGTTTTGGTCAAGGAAATCCGTTCGCTTGGTATTGACATCGAACTTGAATAA
PROTEIN sequence
Length: 835
ITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYSRTNQYGFLETPYRKVDNGKVTNQIDYLSAIEEGRYVIAQANANVDEQGYFTDDLIAVRNENEFTVATRDKIDYMDVSPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLLRAEKPLVGTGMERTVAVDSGTCIVAKRGGVIDSVDAARVVVRVNDEETEPGESGVDIYNFTKYLRSNQNTNINQKPLVNKGDIIAKGDVLADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVRDDRFTSIHIVELSCMARDTKLGPEEITADIPNVSESALSKLDEAGIVSIGAEVRPGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGTNGTVIDVQVFTRDSVAKDSRALHIEHMELSKVRKDLRDKLRIVEADVFQRLEKLIVDEEVISAPRGLYSGHKITQEYLNDLPHDQWFEINLKKVELNEQLELAQEQLRLERERSDDLYEEKRKKLTSGDDLPPGVLKMVKVYLAVKRRIQPGDKMAGRHGNKGVVSMIVPIEDMPYTADGRPVDIVLNPLGVPSRMNIGQVLETHLGWAAKGLGHRINAMLQAHETAVNTIRDLLEKIYNPTEGVAADNQREQLNQFSDQEILELAYRLRDGVPMATPVFDGATEEEIKAMLELARLPTAGQTTLYDGRTGEAFERLVTIGYMYMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAGMPESFNVLVKEIRSLGIDIELE*