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ar4r2_scaffold_2432_5

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2755..3906)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000255|HAMAP-Rule:MF_01012}; EC=2.1.1.189 {ECO:0000255|HAMAP-Rule:MF_01012};; 23S rRNA(m5U747)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_010 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 379.0
  • Bit_score: 381
  • Evalue 1.90e-102
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=RLMC_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 379.0
  • Bit_score: 381
  • Evalue 1.30e-102
23S rRNA (uracil-5-)-methyltransferase RumB similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 379.0
  • Bit_score: 381
  • Evalue 3.70e-103

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
TTGACTAATCAACATCTTAACTGCGACTACTATGAACAAGGTATTTGCCGATCCTGTACGCAAATTACCCTAGATTATGCACAGCAATGCAATCAAAAACAACAACTTGTAGAGCATAGCTTATCGAGCAATGAATCCATTTGTTGGTTGCCCATAGTGACCAGTCGCATACAAGGATTTCGTAATAAAGCCAAAATGGTGGTTAGCGGTCATTGGCAATCACCGATACTCGGCATTATGGATCGTCAATATCAAGCCTATGATTTAGTTAACTGTCAACTATATCCTAATGAATTAAAAGCTACTTTTGAACCCATACGCCATTGGATTCAGCAAACCAAACTGATGCCATACGATGTCGTTAATCGTCAGGGTGAGTTAAAGTACGTTATCGTCAGTATTGACGAGCACACCAAAGCGTTGATGTGCCGGTTAGTACTGAGATCCACCCAGCAATTAGCGAACATTCGAGTCGCTTTGCCAAGTTTAATGCAAGCCATACCAACATTGGCTGTCGTTTCAGTGAATATTCAACCCTTAGCGGCAGCCATTGTGGAAGGTGAACAAGAAATACTACTTAGCGAACAAGCGGTGCTGACACATTGGGTAAATGGGCTGCCATTACATTGTCATCCGCGAAGTTTCTTTCAGACCAATACCCAAGTTGCCGCTGCGCTTTACCGACAGGCACAATCCTGGGTGGCCGACATTCAGCCAAAACAACTATGGGATTTATTCTGTGGTGTTGGGGGTTTTGCCTTACATGCCGCACAGGTAATACAAGGCAAGGTTACGGGTATCGAAATTAATGCTGATGCCATTCACAGCGCACAAAGCAGCGCTAATGCTTTAGGTTTAGCGGAGCGATTAAGTTTTCGCGCATTAAGTGCAACTGATTTTGCACACAAGGCTTCAACAGCATCCCCAGATTGTATTATTGTCAATCCGCCCAGACGCGGTATTGGAACTGAACTGTGTCGATGGATAAACAACTCAACCGCAACACATCTGATTTATTCCAGCTGTAATGCCCAATCACTATCTGAGGATATTCAACAGTTAACCGCTTTCAAGGCTGTCAAAGCTCAAGTGTTTGATATGTTTCCGCACACGCATCACGCCGAGGTGTTGGTATTATTGGTTAGAAACTAG
PROTEIN sequence
Length: 384
LTNQHLNCDYYEQGICRSCTQITLDYAQQCNQKQQLVEHSLSSNESICWLPIVTSRIQGFRNKAKMVVSGHWQSPILGIMDRQYQAYDLVNCQLYPNELKATFEPIRHWIQQTKLMPYDVVNRQGELKYVIVSIDEHTKALMCRLVLRSTQQLANIRVALPSLMQAIPTLAVVSVNIQPLAAAIVEGEQEILLSEQAVLTHWVNGLPLHCHPRSFFQTNTQVAAALYRQAQSWVADIQPKQLWDLFCGVGGFALHAAQVIQGKVTGIEINADAIHSAQSSANALGLAERLSFRALSATDFAHKASTASPDCIIVNPPRRGIGTELCRWINNSTATHLIYSSCNAQSLSEDIQQLTAFKAVKAQVFDMFPHTHHAEVLVLLVRN*