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GWA2_Bacteroidetes_42_15_gwa2_scaffold_202_14

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 14053..14694

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=2178496 bin=GWE2_Bacteroidetes_42_39 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 214.0
  • Bit_score: 425
  • Evalue 3.40e-116
ECF subfamily RNA polymerase sigma-24 subunit Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 4.80e-116
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 188.0
  • Bit_score: 118
  • Evalue 1.90e-24

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGCCGGATTTATTTCAGTCGGATAAAAAGGAATCAGGTTCATATTGGAAAGACGTATGGATTAGGTTTAAAGATGGCGACGTGAAAGCATTTGAAATGATTTATGGCGGTCATGTTGATTTTTTGTATAGCTATGGAACAAAGATGACTTCGGATACGGAGCTTGTGGAAGATGCCATACAGGATTTGTTCCTTTACCTTTTGTCAAGAAAAGACAAACTTTCGGTTCCTGATTCGTTACGATTTTATATCCTGAAAGCTTTTAAGCGTATTTTGCTTGAAAAAATAAGTAAAGAGAAACTGTGGTTGAAGGATAGGGATAGCGATTTCCCCCCTTTTGACTATTCAATTGAATTTGATTCTTCTTTCTTTTTTAATGAGAAGGAAAAAAAAATTGAGTTGATTGAAGAACTGGTAAAACAACTTGATTCACGAAAAAAAGAAGTTATTTTTCTGAGATTTTATAGCGGGTTAAGTTATGATGATATAGGAAATATTGTTGGGATACAGCCATCTTCTGCAAAAAAAATGGTGTATCGGACGATTTCTTCTTTTCGGGATATCTTGAAACCAAAAATCGCCGAATTATTCCTTCTCTTTACCCGGTCTTCCCAAAAAATATCGGATCAATTTAAAAAGTAG
PROTEIN sequence
Length: 214
MPDLFQSDKKESGSYWKDVWIRFKDGDVKAFEMIYGGHVDFLYSYGTKMTSDTELVEDAIQDLFLYLLSRKDKLSVPDSLRFYILKAFKRILLEKISKEKLWLKDRDSDFPPFDYSIEFDSSFFFNEKEKKIELIEELVKQLDSRKKEVIFLRFYSGLSYDDIGNIVGIQPSSAKKMVYRTISSFRDILKPKIAELFLLFTRSSQKISDQFKK*