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GWA2_Bacteroidetes_42_15_gwa2_scaffold_1101_62

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 86583..87239

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=3913644 bin=GWF2_Bacteroidetes_42_66 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 439
  • Evalue 1.80e-120
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 439
  • Evalue 2.50e-120
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 176.0
  • Bit_score: 185
  • Evalue 1.30e-44

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGTGGCGTTCTTCGTTCGACATATCATCGCCCGACAGTATTTTATTGGAAGAAATAAAAAATGGGAACCCGAAGGCTTTTGATGTAATTTTCAAAAAGCATTACGATAATCTGTGCCGTTTTGCATTTTTTTTAATCCATGATGCTGATATGTCTCAGTGCCTGGTGCAAAATGTTTTTATCAAGTTATGGGAACGTCGTTTTGTCTCGGAACCAATTAAAAATGTAGCTGCTTATCTTACCAGCATGGTTAAAAATCAGTGCTCTGATTATTTGAAAGAGCAACGAATCCGAGACCTGACCTTACAGGAAAACAACAACAATGAGCCGGATAATTCAACCGAAGAGGAAATTTTCGGCAGAAATTTTGAAGAATGTTTAGTCATTGCATTATCTAAACTTCCCCCGCGGTGCCGCCTTGCATTTGAATTTAGCCGGTTTGAAAATCTGACAAATAAGGAAATAGCCGAGAAAATGGACATTTCGGTTAAGGGAGTTGAGGCGCTAATTGGCAGATCACTAAAAACGCTGAGGGTTGAATTGAAAGAATTTTTACCATCTTTCGACTCAAGGAATATCAATCCCGTATTGTTTTTTCTAAGAATCCCACAAAGATATTTCATGGCAAGAAAGAATAGCTCATTTTTATCCTTCTGA
PROTEIN sequence
Length: 219
MWRSSFDISSPDSILLEEIKNGNPKAFDVIFKKHYDNLCRFAFFLIHDADMSQCLVQNVFIKLWERRFVSEPIKNVAAYLTSMVKNQCSDYLKEQRIRDLTLQENNNNEPDNSTEEEIFGRNFEECLVIALSKLPPRCRLAFEFSRFENLTNKEIAEKMDISVKGVEALIGRSLKTLRVELKEFLPSFDSRNINPVLFFLRIPQRYFMARKNSSFLSF*