ggKbase home page

GWB1_OD1_40_5_GWB1_scaffold_3677_20

Organism: Candidatus Zambryskibacteria bacterium GWB1_40_5

partial RP 38 / 55 MC: 1 BSCG 36 / 51 ASCG 6 / 38
Location: comp(12853..13434)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=5803270 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 189.0
  • Bit_score: 269
  • Evalue 3.70e-69
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 182.0
  • Bit_score: 148
  • Evalue 2.10e-33
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:KKS35834.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 191.0
  • Bit_score: 382
  • Evalue 4.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWE2_42_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAAAGAAGTGGAAATACTATACGAAGACGGGGATGTGCTGGCAGTAAATAAACCAGCCGGTCTTGTGGTGCATGGTGATGGGAAGACTTCCGAGCCCACACTTGTAGACTGGATACTGAAAAAATATCCAGAAATAAAAGAAGTCGGGGAGCCAGGAAGAAACCCGGAAGGAGAGATTATTTATCGTCCCGGCATTGTTCATAGACTAGACAGGGGAACATCTGGGGTGATGCTTGTTGCAAAGAATCAGAATTCATATGAATTTCTGAAGAAACAGTTTCAAAATCACCAGATAAAAAAAACTTACTACGCTTTTGTTGTTGGAGAAATAAAGGTAACAGAGGGCACGATTGACAGGCCAATCGGCAGAAGCTCAAAGGATTTCCGTATGTGGTCAGCCCAGAGAGGAGCAAGGGGGGAAATGAGAGAGGCAGTTACTGACTACAAGGTTTTAGCTACTGGACTCGGGTACTCCTTTATAGAGGTTTGTCCTAAAACAGGCAGAACACATCAAATCAGGGTGCATTTTAAGGCTATCAGTTATCCTTTGGTCCATGAnnnnnnnnnnGCACTCATATAA
PROTEIN sequence
Length: 194
MKEVEILYEDGDVLAVNKPAGLVVHGDGKTSEPTLVDWILKKYPEIKEVGEPGRNPEGEIIYRPGIVHRLDRGTSGVMLVAKNQNSYEFLKKQFQNHQIKKTYYAFVVGEIKVTEGTIDRPIGRSSKDFRMWSAQRGARGEMREAVTDYKVLATGLGYSFIEVCPKTGRTHQIRVHFKAISYPLVHXXXXALI*