ggKbase home page

GWB1_OD1_49_6_GWB1_scaffold_16869_10

Organism: Candidatus Liptonbacteria bacterium GWB1_49_6

partial RP 33 / 55 MC: 2 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(5068..5595)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN9_9FIRM id=133287 bin=ACD81 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 176.0
  • Bit_score: 185
  • Evalue 6.40e-44
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWB1_OD1_49_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 346
  • Evalue 3.00e-92
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 176.0
  • Bit_score: 163
  • Evalue 5.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_OD1_49_6_curated → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGCGGAAGCCATTCCGTCCCGGCGTCCATGGCCACAAGAGGCAGAGGAAAGCTCTTTCCGAATTCGGGCAGCAGCTCAAGGAAAAGCAGAAGTTCAAGGTGTACTATGGTGTCGGCGAACGGGAGTTGAGGAGGATATTCGAGCGCGCCGCGGAGAAGAGGGGATCGACATCCGCCCAGCTTATCGAACTTTTGGAGCGGCGGCTTGATAATGTGATCTATCGGATGGGCATTGCGGTTTCCCGTTCTGCCGCGCATCAAGCGATAACGCACGGGCATATTCTAGTGAACAAGCGGCGCGTGCGCTCTCCCGGATTCTTGGTTTCGAAAGGGGACGAGATCTCCATTCGCCCCGAGTCCAAATCCCAGGGAGTTTTCAAGGAGCTTTCGGAATCGCTTAAAAAACAGGATATTCCCTCTTGGCTCTCCGTTGATCCGTCGAAGGTCGAGGGGAAGGTGCTGGAAGTTCCGGACGATCCGGCATTGCCGTTCAACGTGAATTTCTTGATCGAGTCGTTTTCCAAATAG
PROTEIN sequence
Length: 176
VRKPFRPGVHGHKRQRKALSEFGQQLKEKQKFKVYYGVGERELRRIFERAAEKRGSTSAQLIELLERRLDNVIYRMGIAVSRSAAHQAITHGHILVNKRRVRSPGFLVSKGDEISIRPESKSQGVFKELSESLKKQDIPSWLSVDPSKVEGKVLEVPDDPALPFNVNFLIESFSK*