ggKbase home page

gwa2_scaffold_4_73

Organism: GWA2_Flavobacteria_35_26

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(79900..81585)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1566023 speci UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 614.0
  • Bit_score: 887
  • Evalue 1.20e-254
rho; transcription termination factor Rho KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 605.0
  • Bit_score: 858
  • Evalue 9.00e-247
Transcription termination factor Rho similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 886
  • Evalue 3.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. KMS → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1686
ATGTTTGATATTTCTGCATTAAAAAACATGAAGCTTTCTGAGCTTCAAGATATTGCTAAATTAGCTAAAACCATCAAGTTTGCTGGCGTAAAAAAAGAGGATTTAATTACTCAAATTTTAGAACAGCAAGCTTCATCTTCAGTTGAAGAAAATACATCAGGAGATGTAAATGCTGATAAACCTAAAAGAGCAAGAATACTTCCTGCTAAAAAAGGGACTATTCAGGCCGTATCTACAGATAATGAAATGGTTTCCAATTCGCCATCTGGAGACACAACAAGCAATCCTTCTGAAGCAACTGAAAATAAAGGACCAAAAGTGGTCAAATTCAGTAAATCGGCTTACGAACAAAAAATTGCTAAAAAAGAGGTTTCAAATGGTAACGAAGGCGAAGTAGAATTGCCATCGGAAACTGTTGATAAAGAAATTACGGAAGCTCCGGCAAACAATAGAAAAGTAAATCCAAATCAACAAAATAAACAAAACCAAAACCCCAATCAAAACGGGAACGGAAATCAAAATCCCAACCAAAAGAACAAGAAGAATAATTTTGGACATTCGGATTATGAATTTGACGGAATTATTGAAAGTGAAGGGGTGTTAGAAATGATGCCTGATGGTTATGGTTTCTTGCGTTCTTCTGATTACAATTATTTGGCTTCGCCAGATGATATTTATTTGTCTACTTCTCAAATTCGTTTGTTTGGTTTAAAAACGGGCGATACTGTTAAAGGTGTGGTTCGTCCTCCAAAAGAAGGAGAGAAATTTTTTCCATTAGTGCGTGTTTTGAAAATCAATGGACACGATCCGCAAGTAGTGCGTGACCGCGTTTCATTTGAACATTTAACGCCTGTTTTTCCAAAAGAAAAATTCAAACTAGCGGATAAACAAAGTACTATTTCTACCCGAATTATTGATTTGTTTTCTCCAATTGGGAAAGGACAACGTGGTATGATTGTAGCACAACCCAAAACGGGTAAAACTATGTTGCTTAAAGATATTGCCAATGCTATTGCCGCGAATCATCCTGAAGTATATTTGATTGTTCTTTTGATCGACGAACGTCCGGAAGAGGTAACCGATATGCAACGCAGTGTGCGTGGAGAAGTTATTGCTTCCACTTTTGATAGAGAACCTCAAGAGCATGTTAAAATTGCCAATATCGTTTTAGAAAAAGCCAAACGTCTTGTAGAGTGTGGACACGATGTAGTCATTCTTTTGGATTCGATTACTCGTTTAGCTCGTGCTTACAACACAGTACAACCTGCTTCAGGAAAAGTGTTGAGTGGTGGAGTAGATGCTAATGCGCTACAAAAACCAAAACGTTTCTTTGGAGCGGCTCGAAATGTGGAGAATGGAGGGTCATTAAGTATTATTGCTACTGCATTGACTGAAACGGGTTCTAAAATGGATGAGGTTATTTTTGAGGAATTCAAAGGAACAGGTAATATGGAATTGCAATTGGATAGAAAAATTGCTAACAAACGTATCTTCCCAGCTATTGATTTAACATCTTCAAGTACACGTAGAGATGATCTGTTATTAGATCCACAAACTTTACAGCGTATGTGGATTATGCGTAAATACCTTTCCGATATGAATCCAGTGGAAGCTATGGATTTTATCAATGACCGATTCAAAAAGACTAGAAATAACGAAGAATTTTTGATTTCAATGAATGATTAA
PROTEIN sequence
Length: 562
MFDISALKNMKLSELQDIAKLAKTIKFAGVKKEDLITQILEQQASSSVEENTSGDVNADKPKRARILPAKKGTIQAVSTDNEMVSNSPSGDTTSNPSEATENKGPKVVKFSKSAYEQKIAKKEVSNGNEGEVELPSETVDKEITEAPANNRKVNPNQQNKQNQNPNQNGNGNQNPNQKNKKNNFGHSDYEFDGIIESEGVLEMMPDGYGFLRSSDYNYLASPDDIYLSTSQIRLFGLKTGDTVKGVVRPPKEGEKFFPLVRVLKINGHDPQVVRDRVSFEHLTPVFPKEKFKLADKQSTISTRIIDLFSPIGKGQRGMIVAQPKTGKTMLLKDIANAIAANHPEVYLIVLLIDERPEEVTDMQRSVRGEVIASTFDREPQEHVKIANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNVENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRKIANKRIFPAIDLTSSSTRRDDLLLDPQTLQRMWIMRKYLSDMNPVEAMDFINDRFKKTRNNEEFLISMND*