ggKbase home page

GWC1_Treponema_61_84_gwc1_scaffold_113_4

Organism: Treponema sp. GWC1_61_84

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 16 / 38
Location: comp(1377..1856)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=GWC1_Treponema_61_84_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 317
  • Evalue 1.00e-83
Probable chemoreceptor glutamine deamidase CheD id=2767828 bin=GWC1_Spirochaetes_27_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 160.0
  • Bit_score: 218
  • Evalue 6.20e-54
Chemotaxis protein CheD similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 157.0
  • Bit_score: 185
  • Evalue 1.30e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_Treponema_61_84_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 480
ATGGCCAATCTCACAATCGGCATCGGCGAATGGGCCGTATCGAAGAATGCGGAAGATGTGCTCAAGACCTACGCGCTCGGTTCCTGCGTCGCGGTCATGATTTACGATTCCAGAACCAGGATCGCGGGCCTCATCCACGTCGCCCTCCCGGAGTCCTCCATCGATACGGAGCGCGCGAAAGTCCAGCCCGGCTATTTCGCCGATACGGGGCTGCCGCGGATGATCCAGGAAATGAAGGACCTCGGCGCCACGCGGGGCACGGTCTGGGTCAAGCTCGCCGGCGGCGCCGCGGTGATGGATGCCCGGAATTTTTTCGACATCGGTAAGCGGAACATACTCGCCGTCAAGCGCATACTTTGGAAAAGCTCCCTCGGTCCCCTGGCCGAGGATACGGGCGGAACCAACAGCCGGACCGTGTCGTTCTCCGTCGACGACGGGGCCGTGAAACTGTCCTCGGGGCCGAAGTCATGGAACATCTAA
PROTEIN sequence
Length: 160
MANLTIGIGEWAVSKNAEDVLKTYALGSCVAVMIYDSRTRIAGLIHVALPESSIDTERAKVQPGYFADTGLPRMIQEMKDLGATRGTVWVKLAGGAAVMDARNFFDIGKRNILAVKRILWKSSLGPLAEDTGGTNSRTVSFSVDDGAVKLSSGPKSWNI*