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GWC1_Treponema_61_84_gwc1_scaffold_1504_20

Organism: Treponema sp. GWC1_61_84

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 16 / 38
Location: 21939..22472

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3T3_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 140.0
  • Bit_score: 91
  • Evalue 7.40e-16
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC1_Treponema_61_84_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 354
  • Evalue 1.10e-94
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 140.0
  • Bit_score: 91
  • Evalue 2.10e-16

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Taxonomy

GWC1_Treponema_61_84_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 534
GTGGAGGATCCCGGCCGGTTCCGCGCGGAGGCTCTCTGGAAGGAATGGTTCCCGCGCGTGACGGTGTACGTCCGCTCTTCGTTTCCCGTAATGGGAGCGGAGGCCGAGGACATCGCCCAGGAGACCTTCCTCCGGCTCGTCGGAAAAGTACGGGAAGTCGGTCCGAATCCCGCAGCCCTCCTGTACCGGATCGCGCGCAATCTCTGCATCGACACGCTCAGGAAAAAACGGACGGTTCCTTTCGGCGAGGAAGCCGCGCAGGTTCCCGATACGGCCGAGGGACCGGAGGCGTCCGCGATGTCGAGGGAGTCAGGAGACGAAGCGCGCGCGGCGATGGAAGCGTTGCCGCCCGGGGACAGGGAGCTCTGCTTCCTACGCTACTTCGAGGAACTCTCGGTACGCGACATCGCGCGCCTCGTGGGCAAGAGCGAAGGGACGGTGAAATTCGGGCTATTCAGGGCGCGCGGAAAGATCAGGAAAGCGCTGGAGGATCGTAATGAAGAAGAACGCCGGAGACGAATCCCTACGGGATGA
PROTEIN sequence
Length: 178
VEDPGRFRAEALWKEWFPRVTVYVRSSFPVMGAEAEDIAQETFLRLVGKVREVGPNPAALLYRIARNLCIDTLRKKRTVPFGEEAAQVPDTAEGPEASAMSRESGDEARAAMEALPPGDRELCFLRYFEELSVRDIARLVGKSEGTVKFGLFRARGKIRKALEDRNEEERRRRIPTG*