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GWB1_Spirochaetales_60_80_GWB1_scaffold_26_19

Organism: Spirochaetes bacterium GWB1_60_80

near complete RP 51 / 55 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(20438..21310)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2787887 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 566
  • Evalue 2.20e-158
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=GWB1_Spirochaetes_60_80_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 290.0
  • Bit_score: 566
  • Evalue 3.10e-158
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 290.0
  • Bit_score: 406
  • Evalue 4.80e-111

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Taxonomy

GWB1_Spirochaetes_60_80_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGAAATCTAATCAAACGCTTAAGACCAAGGTTAATTACTCCGGCGACTCTAATGTCCTCTCGATATATCTCAAGGAAATAAACCGCATCCCTTTACTTACCCGAGAGCAGGAAGATCGCTGGGCTCGCCAGGCAGCCACCGGCGAGCAGATTGCCAAGGATATGCTCGTCAAAAGCAATCTGCGGTTTGTGGTCAATGTTGCCAAGCGCTATCAGAATCAGGGCTTGCCTCTGGCTGACTTGATCAGTGAGGGCAATATTGGCTTAATCAACGCTATCGACCGCTATGATGTGGATAAAGGCTATCATTTTATCAGTTACGCTGTGTGGTGGATCCGGCAGGCTATTCTGAAGGCTATTTGCGAAAAAAGTCGTATGATCCGCTTGCCCTTGAACCGCGCCAATGAATTGGTCCAGATTGAGAAGGCTCGTAAAATCGTCAATAACGGCAGCAACGAGGAAAACGAGATTCGCGAGATTGCCCGGATGCTGGATATGGACAGCGCCCACGTCGCTGACCTGGTCAACATATCGCGTGATCTGGTTTCGTTAGAAACTCCGGTTTTCAACGAGCGCGACTCGAGCGTTTTGGGTGACTTTATCGAAAACGATAAATACAAGACACCGGATGACTACGTGATCGAGCAAAGCCTCAAGGATGACATCAACACCATCTTGCTCACCTTGACCGAGAAGGAACGTGAGGTTGTGCAGTATCGCTTTGGGTTGAACGGCCGCCGTGCCATGAGCCTCAAGGAAATTGGCGATCGGTTCAAGCTAACTAAGGAACGCATCCGGCAAATAGAGAAGAATGCGCTCAAACGCCTGTCAGTTCCCGGCCGGGCCCAGATACTGGAGACCTATGTAGCCTGA
PROTEIN sequence
Length: 291
MKSNQTLKTKVNYSGDSNVLSIYLKEINRIPLLTREQEDRWARQAATGEQIAKDMLVKSNLRFVVNVAKRYQNQGLPLADLISEGNIGLINAIDRYDVDKGYHFISYAVWWIRQAILKAICEKSRMIRLPLNRANELVQIEKARKIVNNGSNEENEIREIARMLDMDSAHVADLVNISRDLVSLETPVFNERDSSVLGDFIENDKYKTPDDYVIEQSLKDDINTILLTLTEKEREVVQYRFGLNGRRAMSLKEIGDRFKLTKERIRQIEKNALKRLSVPGRAQILETYVA*