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GWB1_Spirochaete_62_6_GWB1_scaffold_5116_18

Organism: Treponema sp. GWB1_62_6

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(18179..18757)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor id=3435350 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 193.0
  • Bit_score: 367
  • Evalue 1.00e-98
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC1_Treponema_61_84_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 192.0
  • Bit_score: 367
  • Evalue 1.40e-98
rpoE; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 192.0
  • Bit_score: 242
  • Evalue 1.40e-61

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Taxonomy

GWC1_Treponema_61_84_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAGCCCGGCGCGGACGGGCTCGGGAACGACGGGCTCGAAGACGGAGAGCTCGTCGCCCGGGTCGTCATGGGGGAAACGGAACTTTTCGCGTTTCTGGTCAGGAGGCACCAGCGGGCCGTGTACGGCCTGGGCATGGGCTTCTACCGGAATGCCGATGACGCCGCCGATTTCGTCCAGGACGTCTTCCTCAAGGCGTTCCGCAGTTTGGGCACCTTCCAGGGACGAGCGCGTTTCTCCACTTGGTTGTACCGCATAGCGTACAACGCCGCGATCAACGGCACCAAGCGGAGGAAGGAGTACAGGAGCCTCGCGGAGGACGCGGAGATTCCCGATTTCGATGGACCCGAGCGTCTGACGCTCAGGTCCCTGGCCGCCGCGGCGGTCGTCGAAGCnnnnnnnnnnnnnnnnnnnnnnnnnCGAATCTGCGTGGAATTGTTCTTCTTCTATGATCTTTCCTATCCGGAAATCGAGACGGTCACGGGTTATCCCGTGAATACGATCAAATCGCACGTATTCCGCGCGAAGAAACTGCTGAGGGAAAAACTCCGCGACGAAGCGGAAGGAGGTTTCGAATGA
PROTEIN sequence
Length: 193
MKPGADGLGNDGLEDGELVARVVMGETELFAFLVRRHQRAVYGLGMGFYRNADDAADFVQDVFLKAFRSLGTFQGRARFSTWLYRIAYNAAINGTKRRKEYRSLAEDAEIPDFDGPERLTLRSLAAAAVVEXXXXXXXXXRICVELFFFYDLSYPEIETVTGYPVNTIKSHVFRAKKLLREKLRDEAEGGFE*