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GWD2_RBX1_39_127_gwd2_scaffold_65

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Displaying items 31-60 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_65_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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28033..29193
DNA (1161bp) protein (387aa)
Exodeoxyribonuclease 7 large subunit id=3953581 bin=GWF2_OP9-related_38_17 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
exodeoxyribonuclease 7 large subunit Tax=GWF2_RBX1_38_17_curated
exodeoxyribonuclease 7 large subunit
GWD2_RBX1_39_127_gwd2_scaffold_65_31
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29250..29633
DNA (384bp) protein (128aa)
Exodeoxyribonuclease 7 small subunit id=2018550 bin=GWE2_RBX1_39_32 species=Clostridium nexile genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Exodeoxyribonuclease 7 small subunit Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_32
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29578..30477
DNA (900bp) protein (300aa)
trans-isoprenyl diphosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=24609772 bin=RAAC11 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
trans-isoprenyl diphosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWF2_RBX1_38_17_curated
polyprenyl synthetase
GWD2_RBX1_39_127_gwd2_scaffold_65_33
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30738..32675
DNA (1938bp) protein (646aa)
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=GWF2_RBX1_38_17_curated
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase id=2078559 bin=GWD2_RBX1-related_39_127 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_65_34
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32705..33421)
DNA (717bp) protein (239aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=GWF2_RBX1_38_17_curated
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 id=2018544 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_65_35
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(33405..34274)
DNA (870bp) protein (290aa)
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=GWF2_RBX1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=3953557 bin=GWF2_OP9-related_38_17 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
GWD2_RBX1_39_127_gwd2_scaffold_65_36
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(34265..35125)
DNA (861bp) protein (287aa)
dapF; putative diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWF2_RBX1_38_17_curated
dapF; putative diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=2078571 bin=GWD2_RBX1-related_39_127 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_65_37
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(35258..36124)
DNA (867bp) protein (289aa)
tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=2018538 bin=GWE2_RBX1_39_32 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
tRNA isopentenyltransferase MiaA Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_38
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(36159..36848)
DNA (690bp) protein (230aa)
Peptidase membrane zinc metallopeptidase id=2018536 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase membrane zinc metallopeptidase; K06973 Tax=GWF2_RBX1_38_17_curated
peptidase membrane zinc metallopeptidase
GWD2_RBX1_39_127_gwd2_scaffold_65_39
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(37145..37360)
DNA (216bp) protein (72aa)
Carbon storage regulator homolog id=2018534 bin=GWE2_RBX1_39_32 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
carbon storage regulator CsrA; K03563 carbon storage regulator Tax=GWF2_RBX1_38_17_curated
csrA; carbon storage regulator
GWD2_RBX1_39_127_gwd2_scaffold_65_40
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(37385..37864)
DNA (480bp) protein (160aa)
Flagellar assembly factor FliW id=2078586 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K13626 flagellar assembly factor FliW Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_65_41
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(37877..39121)
DNA (1245bp) protein (415aa)
Flagellar hook-associated protein 3 id=2018492 bin=GWE2_RBX1_39_32 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar hook-associated protein 3; K02397 flagellar hook-associated protein 3 FlgL Tax=GWF2_RBX1_38_17_curated
flagellar hook-associated protein 3
GWD2_RBX1_39_127_gwd2_scaffold_65_42
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(39138..40523)
DNA (1386bp) protein (462aa)
Flagellar hook-associated protein FlgK id=2018489 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK Tax=GWF2_RBX1_38_17_curated
flagellar hook-associated protein FlgK
GWD2_RBX1_39_127_gwd2_scaffold_65_43
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(40548..41045)
DNA (498bp) protein (166aa)
hypothetical protein AcelC_10217 id=2018486 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
FlgN family protein Tax=GWF2_RBX1_38_17_curated
FlgN family protein
GWD2_RBX1_39_127_gwd2_scaffold_65_44
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(41017..41325)
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=2018484 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_45
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(41572..41913)
DNA (342bp) protein (114aa)
Putative peptidoglycan hydrolase id=2018481 bin=GWE2_RBX1_39_32 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flgJ; putative peptidoglycan hydrolase Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_65_46
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(41969..43063)
DNA (1095bp) protein (365aa)
Flagellar P-ring protein id=2078614 bin=GWD2_RBX1-related_39_127 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flagellar P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=GWF2_RBX1_38_17_curated
Flagellar P-ring protein
GWD2_RBX1_39_127_gwd2_scaffold_65_47
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(43109..43708)
DNA (600bp) protein (200aa)
Flagellar L-ring protein id=2078616 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flagellar L-ring protein; K02393 flagellar L-ring protein precursor FlgH Tax=GWF2_RBX1_38_17_curated
flagellar L-ring protein
GWD2_RBX1_39_127_gwd2_scaffold_65_48
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(43735..44466)
DNA (732bp) protein (244aa)
Flagella basal body P-ring formation protein FlgA id=2018470 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagella basal body P-ring formation protein FlgA; K02386 flagella basal body P-ring formation protein FlgA Tax=GWF2_RBX1_38_17_curated
flagella basal body P-ring formation protein FlgA
GWD2_RBX1_39_127_gwd2_scaffold_65_49
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(44471..45259)
DNA (789bp) protein (263aa)
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG id=24610373 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=GWF2_RBX1_38_17_curated
flgG; flagellar basal body rod protein FlgG
GWD2_RBX1_39_127_gwd2_scaffold_65_50
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(45275..46018)
DNA (744bp) protein (248aa)
Flagellar basal-body rod protein FlgF id=2078622 bin=GWD2_RBX1-related_39_127 species=Thermoanaerobacter italicus genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flagellar basal-body rod protein FlgF; K02392 flagellar basal-body rod protein FlgG Tax=GWF2_RBX1_38_17_curated
flagellar basal-body rod protein FlgF
GWD2_RBX1_39_127_gwd2_scaffold_65_51
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

46524..47192
DNA (669bp) protein (223aa)
YggS family pyridoxal phosphate enzyme id=2078624 bin=GWD2_RBX1-related_39_127 species=Enterococcus pallens genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
alanine racemase domain-containing protein; K06997 Tax=GWF2_RBX1_38_17_curated
alanine racemase domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_65_52
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

47208..47654
DNA (447bp) protein (149aa)
Cell division protein sepF id=2078627 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K09772 cell division inhibitor SepF Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_65_53
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

47654..48469
DNA (816bp) protein (272aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=GWF2_RBX1_38_17_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=2078632 bin=GWD2_RBX1-related_39_127 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_65_54
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

48483..48746
DNA (264bp) protein (88aa)
Putative uncharacterized protein id=1982746 bin=GWE2_RBX1_39_32 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K02221 YggT family protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_65_55
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

48765..49055
DNA (291bp) protein (97aa)
hypothetical protein SclubSA_02725 id=1982747 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein SclubSA_02725 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_56
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

49055..49342
DNA (288bp) protein (96aa)
UPF0235 protein TherJR_1860 id=1982752 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09131 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_65_57
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

49409..50656
DNA (1248bp) protein (416aa)
Recombination protein MgsA id=1982757 bin=GWE2_RBX1_39_32 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
recombination protein MgsA; K07478 putative ATPase Tax=GWF2_RBX1_38_17_curated
recombination protein MgsA
GWD2_RBX1_39_127_gwd2_scaffold_65_58
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

50903..51619
DNA (717bp) protein (239aa)
Rare lipoprotein A id=2078650 bin=GWD2_RBX1-related_39_127 species=Streptobacillus moniliformis genus=Streptobacillus taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rare lipoprotein A; K03642 rare lipoprotein A Tax=GWF2_RBX1_38_17_curated
rare lipoprotein A
GWD2_RBX1_39_127_gwd2_scaffold_65_59
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

51833..52318
DNA (486bp) protein (162aa)
id=1982761 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982761 Tax=GWF2_RBX1_38_17_curated
Displaying items 31-60 of 101 in total

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