ggKbase home page

GWE1_Spirochaetes_32_154_gwe1_scaffold_198_29

Organism: Spirochaetes bacterium GWE1_32_154

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 28694..29566

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=1287339 bin=GWE1_Spirochaetes_32_154 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 559
  • Evalue 1.60e-156
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=GWE2_Spirochaetes_31_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 290.0
  • Bit_score: 559
  • Evalue 2.20e-156
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 288.0
  • Bit_score: 317
  • Evalue 3.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Spirochaetes_31_10_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGGCAGATTTAAAAAAAATAAGTAATTTTAGCGATTCATATTCCAATTCATTATCATATTATTTAAACCAGATCAGTAAAATACCTTTATTGACTCGTGAAGAAGAGGAAGATTTAGCAAGAAAAGCAAAAAATGGAAACGTTATCGCCCGCGAGCGTTTAATTAGAGCAAATTTACGATTTGTTGTTGCAGTTGCAAAAAAATACAAAAGCAGAGGTATATCACTTTCAGATTTAATTAATGAAGGTAATATAGGCTTAATGAAAGCTATTGAAAAATATGATGTTGACAGAGGGTATCATTTTATCAGTTACGCTGTCTGGTGGATTAAACAATCTATTCTCAAAGCAATTTGTGAAAAGTCACGACCAATCAGACTTCCTTTAAACAGAGCTAATGAACTCGTACAAATTGAACGTAAAAAAAGAGAAATAGAAACGAAAGAAGATGAATCACCAACTTCTGAAAGACTTGCTAATGAATTAAAAATGGATCATGGTTTAGTAAGACAATTAATGGAAATATCAAGAGAAACAGTTTCACTTGATACACCGGTGTATCAAAGTTCAAATAGTGCTTCATTTTTAGGTGATTTTATAACTGATTTAAAATACCAGTCACCGGATGACTCTATTGAAAGTTCTTCATTATCTGATGCTATAAATGGAATACTTGATACGTTAACAGAAAAAGAAAGAGAAATAATTGTATTACGTTTTGGTTTAAATGGTAATAAAGCGATGAGTTTAAAAGAAATAGGCAATGTCTACAAACTCACAAAAGAACGAATCAGACAAATCGAGAAAAAAGCCTTAGTAAGAATGAGACATAATACAAGAAGTGTTAAATTAAGAAATTTTGTTGAAGCGTAA
PROTEIN sequence
Length: 291
MADLKKISNFSDSYSNSLSYYLNQISKIPLLTREEEEDLARKAKNGNVIARERLIRANLRFVVAVAKKYKSRGISLSDLINEGNIGLMKAIEKYDVDRGYHFISYAVWWIKQSILKAICEKSRPIRLPLNRANELVQIERKKREIETKEDESPTSERLANELKMDHGLVRQLMEISRETVSLDTPVYQSSNSASFLGDFITDLKYQSPDDSIESSSLSDAINGILDTLTEKEREIIVLRFGLNGNKAMSLKEIGNVYKLTKERIRQIEKKALVRMRHNTRSVKLRNFVEA*