ggKbase home page

GWF1_CP_41_5_gwf1_scaffold_1935_6

Organism: Spirochaetes bacterium GWF1_41_5

partial RP 37 / 55 BSCG 38 / 51 ASCG 9 / 38 MC: 1
Location: 5165..6784

Top 3 Functional Annotations

Value Algorithm Source
VacB and RNase II family 3'-5' exoribonuclease (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] Tax=GWF1_Spirochaetes_41_5_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 539.0
  • Bit_score: 1079
  • Evalue 0.0
VacB and RNase II family 3'-5' exoribonuclease (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 529.0
  • Bit_score: 389
  • Evalue 1.50e-105
VacB and RNase II family 3'-5' exoribonuclease n=1 Tax=Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150) RepID=D5U636_BRAM5 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 529.0
  • Bit_score: 389
  • Evalue 5.20e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Spirochaetes_41_5_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1620
ATGAAAAAAAAAACACATTCAGGCCGGCCAAGACGAAAAACATCTTTCCGGAAACATTTTGCCCGCAGAGAATTTTCCCCCGGGCACAAGGCTTCACCGGCACCTGGCAAAAAAAGCAGAATTGAGGTTGATCCAGCTAATGCCGGCGGCGATTTCAGCTATATTCTGGAACGCTATGATTTTCCATCCGGCTTTGACAAACGCTGCCGTGATGAAGCTGCCCGCGCCTGTAAAAAAAATACTGCGCCCGGCGAACGCCTGGACCTTACAGCAGAAAATATTATTACCATAGACGGAGAAACAGCCCGCGATTTCGACGATGCCGTTTCCATAAACACAATTACCAGCGGATTTCTGCTGGGAGTGCATATAGCAGATGTAAGTCATTATATAGCCATGAACTCATGGCTGGACCGCGAAGCGCAAAAACGCGGAAATTCCGTTTATCTTCTTGACCAGGTAATTCCCATGCTGCCGGAAGAGTTGTCCAATGATCTATGTTCCCTGGTAGAGGGAAAACCGCGGCTTACCTGCTCCTGTTTTATGCATATATCCATGCAGGGCAAAATACTTTCCTATGATTTTAAAAAAAGTCTGATAAAAAGCCGAAAGCGCTGCACTTACCGTGAAGTACAGGATATTCTTGACGGTAAAAAAGCGGATACCGAACTGGAATCCCTGCTGGCAAAGGCATCGGTACTCGCCCGACTGCTTGGTGAAAAAAGACTGGAATTTGGCTCCATTGATTTTGAAACCGATGAACAGCAGATCACGCTTGACGCCAAAGGATTCCCCGTTGAGATAAAACGCAAACAGAGACTTTTTTCTGAACAAATTATTGAAGAATTTATGCTCTGCGCCAATATCTGCGCTGCTGAAAAACTGACTGTTCAAAAAACCGGAATTTTCCGAGTTCATGATGCGCCGGATGAAAAAAAAATCAGGACTTTTCTGGAAACCGTACATGATCTCGGCTACCGGATTAAAGAAGCCGGCCATAAAAACCGCTATCAGGCATTTTTAGAAAATATTACCGATGAAGAACGCAAACGTGTTCTCTCCACCCTGCTGCTGCACTGCATGAAACAGGCAAAATATTCAGTAAATAATACCGGCCATTACGGACTGGGATTTCCCCGTTATACCCACTTTACCTCGCCCATAAGACGCTGCAGTGATTTGATTGTGCACCGGATGCTTTTTGCCGACAGCGGCCGCCTGGTTTATTCTGCAGATGAACTTGAAAAGATAGCGGAAAAAACCAGTCTTTGCGAGCGTACGGCAGTAGAGGCAGAGCGAGATCTGTATAAAATAAAATCCGCGCGTTTTATGGCCGGTTTGATTGGAAAAATATTCAACACGGTTGTTTCCGGAATAATTCCCCGCGGCATTTTTGTTCAGGATCCGGCAACCGGTATTGAAGGTTTTGTTTCTGCATACGCTTTTCCGGAATCTTCCCGGTACAATGAAGAAAAAAAAATTTTTCAGAAGAAAGACGGATCTCCGCTCTATTTTACCGGAGACCGCATTCGGGTTAAATTGATAAAAGTTAATACCGCCAGATGTTTTATAGATTTTGTGCCTGTAGAATCCCAAAAGTTTTCGAACCGGCATTTTTAA
PROTEIN sequence
Length: 540
MKKKTHSGRPRRKTSFRKHFARREFSPGHKASPAPGKKSRIEVDPANAGGDFSYILERYDFPSGFDKRCRDEAARACKKNTAPGERLDLTAENIITIDGETARDFDDAVSINTITSGFLLGVHIADVSHYIAMNSWLDREAQKRGNSVYLLDQVIPMLPEELSNDLCSLVEGKPRLTCSCFMHISMQGKILSYDFKKSLIKSRKRCTYREVQDILDGKKADTELESLLAKASVLARLLGEKRLEFGSIDFETDEQQITLDAKGFPVEIKRKQRLFSEQIIEEFMLCANICAAEKLTVQKTGIFRVHDAPDEKKIRTFLETVHDLGYRIKEAGHKNRYQAFLENITDEERKRVLSTLLLHCMKQAKYSVNNTGHYGLGFPRYTHFTSPIRRCSDLIVHRMLFADSGRLVYSADELEKIAEKTSLCERTAVEAERDLYKIKSARFMAGLIGKIFNTVVSGIIPRGIFVQDPATGIEGFVSAYAFPESSRYNEEKKIFQKKDGSPLYFTGDRIRVKLIKVNTARCFIDFVPVESQKFSNRHF*