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GWF1_CP_41_5_gwf1_scaffold_1491_5

Organism: Spirochaetes bacterium GWF1_41_5

partial RP 37 / 55 BSCG 38 / 51 ASCG 9 / 38 MC: 1
Location: 6788..7342

Top 3 Functional Annotations

Value Algorithm Source
rpoE; protein RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF1_Spirochaetes_41_5_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 358
  • Evalue 4.80e-96
RNA polymerase sigma factor id=2299593 bin=GWB2_Nitrospirae_rel_47_37 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 184.0
  • Bit_score: 160
  • Evalue 1.40e-36
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 185.0
  • Bit_score: 127
  • Evalue 4.70e-27

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Taxonomy

GWF1_Spirochaetes_41_5_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 555
TTGCAGTCTGATACAAACCTGATGCTTGATTTTGCGGGAGGTGATATTTCCGCCTTTGAGCAGATTATGATCAAATATAAAAAACTGGTAATGAATGTAGCTTTCCGCTATGTTCAGGATAAAGGCCTGGCGGAAGATATAACCCAGGATGTGTTTATGAAAATATACAATTCCGCAGACAGTTATAAGCCGAAAGCGGCATTATCAACCTGGATCTACCGGATCACGGTTAATCATAGTTTAAATAAACTAAGAAAAATTAAAAAAATAAAAACAATATCCCTGGCAAGTATTGGCGAGATTTCCGATTCCGATAAAAATTTTTTCCCGGCTGAAAACATGGAAAATTCCGAATTGACAAATTTTATCAGAAATGCGGTTGCTTCATTGCCGCACAGACAGCAAACCGCTGTAATTTTAAAGAAATATGAAAAACTTTCTTATGATGAAATAGCAAAAATTATGAACTGCACAATCCCGGCAGTTGATTCCCTGTTACAACGGGCAAAAGAAAATTTAAAAATAAAAATTTCGCCCATTGTAACGGCCAAATGA
PROTEIN sequence
Length: 185
LQSDTNLMLDFAGGDISAFEQIMIKYKKLVMNVAFRYVQDKGLAEDITQDVFMKIYNSADSYKPKAALSTWIYRITVNHSLNKLRKIKKIKTISLASIGEISDSDKNFFPAENMENSELTNFIRNAVASLPHRQQTAVILKKYEKLSYDEIAKIMNCTIPAVDSLLQRAKENLKIKISPIVTAK*