ggKbase home page

GWF1_CP_41_5_gwf1_scaffold_1065_1

Organism: Spirochaetes bacterium GWF1_41_5

partial RP 37 / 55 BSCG 38 / 51 ASCG 9 / 38 MC: 1
Location: 106..942

Top 3 Functional Annotations

Value Algorithm Source
rluD4; pseudouridine synthase (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWF1_Spirochaetes_41_5_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 278.0
  • Bit_score: 561
  • Evalue 5.60e-157
rluD4; pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 281.0
  • Bit_score: 184
  • Evalue 3.70e-44
Pseudouridine synthase id=4070476 bin=GWA2_Bacteroidetes_42_15 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 279.0
  • Bit_score: 191
  • Evalue 1.40e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Spirochaetes_41_5_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 837
ATGGAAAATAACAATCTTCTCACAGTTGTTAAAACTTTATTCCCTGAATGTTCCGGCAACAAACTAAAAAAAATAATTTCTTCAGGAAGAATAACAGTTAATAATGAAATTTGCAGGCAGGCTGCAAGAATTATTGCTCCTGATGAAAAAATTTCGGTTTTAAGCAGAAGTTTCCGAAGACATGCCATTGACGAGAATGTAATTATTGAATACGAAGACAATGATCTGCTGATAATCAATAAACCATCCGGTCTTCTTTCAGTGCCTGACAACAGCGGTTTAAAAAGCGCACGGGATATATGTGCGGTATATCTTGCTTCTGTGCGCAAACATAAAAATCTCTATATTGTTCACCGGCTTGACCGTGATGCATCGGGCCTTATGCTGTTTGCCAAAAATCATAACACCCAGAAGGCGCTGATTGCCCTTTTTACCGGGCATTTCATCATGCGGCAATATACTGCCTGGGTAGAGGGCAGCTTAGAACAGGAAAACGGCAAGATTGATACTTATATTTTTAAAGATGAAAATACTTTTCGCGTATCCGTCTGCGGAGCTGAAAAAGAAGGAGCCAAACGGGCCATAACCGGTTACCATGTTCTTGCCTGTAAAAATAATTTTTCATTATGCGAAATTACCCTTGAAACCGGAAGAAAAAATCAGATTCGCGTTCATATGGCGCATATCGGACATGCCGTATGCGGGGATCGCATGTACGGCAGCAAGTCGTCATACCGGCTGCTTCTGCATGCGCACAGGCTTTTTTTTCGGCATCCTGTTAACGGGAAAATGCTTGATATAAAATCTGCGCTGCCGGACGATTTTGTCAATCCTTAA
PROTEIN sequence
Length: 279
MENNNLLTVVKTLFPECSGNKLKKIISSGRITVNNEICRQAARIIAPDEKISVLSRSFRRHAIDENVIIEYEDNDLLIINKPSGLLSVPDNSGLKSARDICAVYLASVRKHKNLYIVHRLDRDASGLMLFAKNHNTQKALIALFTGHFIMRQYTAWVEGSLEQENGKIDTYIFKDENTFRVSVCGAEKEGAKRAITGYHVLACKNNFSLCEITLETGRKNQIRVHMAHIGHAVCGDRMYGSKSSYRLLLHAHRLFFRHPVNGKMLDIKSALPDDFVNP*