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GWF1_Sphingobium_63_6_gwf1_scaffold_2038_2

Organism: Sphingomonadales bacterium GWF1_63_6

near complete RP 46 / 55 MC: 3 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 1989..4046

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Sphingomonadaceae RepID=N1MUQ0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 686.0
  • Bit_score: 1267
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 685.0
  • Bit_score: 1322
  • Evalue 0.0
RNA polymerase sigma 70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 686.0
  • Bit_score: 1216
  • Evalue 0.0

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Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2058
ATGGCGACCAAGGCGAACAGCAAGAATGCGGCGGGTGCAGGCGATGGTGGGGATGAAGGTGGCGATGCGCCCCTGCTCGACCTCAACGAAGCCTCGGTCAAGAAGCTGCTCGCCCGCGCCAAAAAGCGTGGCTACATCACCTATGACGAGTTGAACAACGCCCTGCCGCAGGACCAGATGTCCTCCGAGCAGATCGAGGATGTCATGTCCGCGCTCAACGACATGGGCGTCAACATCGTCGAAAATGAAGAAGCCAGCGAGGATGGCGAGGACCAGCAGCGCGAGGACGACAACGACGACGCCAATGAGGCGGCGGACGATGACGATGGCTCGCCGCGCCTGGTCACCGAAAAGAAGAAGGAAACGGTCGATCGCACCGACGATCCCGTGCGCATGTATCTGCGCGAAATGGGCGCGGTGGAACTGCTCAGCCGTGAGGGCGAAATCGCCATCGCCAAGCGGATCGAGGCCGGCCGCGACACCATGATCCTGGGTCTGTGCGAAAGCCCGACCACCTTCAACGCGATCATCGAATGGTCGACCGCGCTCAACAATGGCGAAATGCAGCTGCGTGAGATTCTCGATCTCGACGCCATGCTCTCCAAAGACCCTGCCCCGGAAAGCCTGGAGGAAGGTGCAGAGGATGATGATGGCGAGATCAGCGAGAAGACCGCTGGCCCCAGCTTCAAGGAAGAAGAAGAGCCGGAGGAAGAATCCGCCGACGCCGATGAGGATGAGGAGGGCGCCGAACGCCGCCCCCGCCGCGTCGAAGAGGAAGAGGAGGAGGACAACACCCTCTCCCTTGCGCAGATGGAAGAAACGCTCAAGCCGATCGCGCTGGAGAAGTTCGCCACCATCACGGAAATCTTCCGTGCCTTTTCGGCCATTCAATCGTCGCGCATGCTTGCCATGGGTACCGGCGAAGTGCTGAGCCAGAAGGATGAGGATGATTATCAGGAACTGCGCGAAAGCCTGACCGCGCAGGTCGAGAGCGTCCAGTTCCATCAGCAGAAGATCGAATATCTGGTCGATCAGCTCTATGCCTATAACCGCCGCCTCACCGCGCTGGGCGGGCAGATGTTGCGTCTGGCCGAACGGCACAAGGTCAGCCGCAAGGATTTCCTCGACCGCTACGTCAATTTCGAACTGGACGACGCCTGGCTTGACCGGGTCAGCGGCATCGACAAGAAGTGGGCCGCCTTTGCTGCCGCCGAAGCGCGTGCGGTTGAACGCATCCGCAACGAAGTCAGCGAAATCGCGCAGGCGACCGGCATGTCGCTCGGCGAATTCCGCCGCATCGTCAACATGGTGCAAAAGGGCGAGCGCGAAGCGCGCATCGCCAAGAAGGAAATGGTCGAAGCCAATCTGCGCCTCGTCATCTCCATCGCCAAGAAATACACCAATCGCGGTCTGCAATTCCTGGATCTCATTCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGATAAGTTCGAATATCGTCGCGGCTACAAGTTCAGCACCTATGCGACCTGGTGGATCAGGCAGGCGATTACGCGCTCGATCGCGGATCAGGCGCGGACCATCCGCATCCCGGTGCATATGATCGAAACGATCAACAAGCTGGTGCGCACCAGCCGCCAGTTCCTGCATGAGCAGGGCCGCGAACCGACCCCGGAGGAGATGGCCGAGCGCCTCTCCATGCCGCTGGAGAAGGTGCGCAAGGTGATGAAGATCGCCAAGGAGCCGATCAGCCTCGAAACGCCGATCGGCGACGAGGAAGACAGCCACCTGGGCGATTTCATCGAGGACAAGAATGCGATCATCCCGGTGGATGCCGCGATCCAGGCGAACCTCAAGGAAACGGTTACCCGTGTCCTCGCCAGCCTGACCCCGCGCGAAGAGCGCGTGTTGCGCATGCGTTTTGGCATCGGCATGAACACCGATCACACGCTGGAAGAGGTCGGTCAGCAGTTCAGCGTGACCCGCGAACGCATCCGTCAGATCGAGGCGAAGGCGCTGCGCAAGCTCAAACACCCTTCGCGCAGCCGCAAGATGCGCAGCTTTCTCGACCAATAA
PROTEIN sequence
Length: 686
MATKANSKNAAGAGDGGDEGGDAPLLDLNEASVKKLLARAKKRGYITYDELNNALPQDQMSSEQIEDVMSALNDMGVNIVENEEASEDGEDQQREDDNDDANEAADDDDGSPRLVTEKKKETVDRTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDTMILGLCESPTTFNAIIEWSTALNNGEMQLREILDLDAMLSKDPAPESLEEGAEDDDGEISEKTAGPSFKEEEEPEEESADADEDEEGAERRPRRVEEEEEEDNTLSLAQMEETLKPIALEKFATITEIFRAFSAIQSSRMLAMGTGEVLSQKDEDDYQELRESLTAQVESVQFHQQKIEYLVDQLYAYNRRLTALGGQMLRLAERHKVSRKDFLDRYVNFELDDAWLDRVSGIDKKWAAFAAAEARAVERIRNEVSEIAQATGMSLGEFRRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEQGREPTPEEMAERLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAIIPVDAAIQANLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKMRSFLDQ*