ggKbase home page

GWF1_Sphingobium_63_6_gwf1_scaffold_4304_3

Organism: Sphingomonadales bacterium GWF1_63_6

near complete RP 46 / 55 MC: 3 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(1135..1743)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2DIJ2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 203.0
  • Bit_score: 302
  • Evalue 4.10e-79
TetR family transcriptional regulator {ECO:0000313|EMBL:EXS69731.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 202.0
  • Bit_score: 399
  • Evalue 2.00e-108
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 202.0
  • Bit_score: 292
  • Evalue 9.20e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGAACAGGTTGCAACCACTTCTCGGGGTCGCCCGCGTGAATTTGATCCGGCGCAGGCCTTGGCCGCCGCGCTGCAGGTCTTCTGGCGGCGTGGCTATGAAGGCGCGTCCATCTCGGAACTGACCGAGGCGATGGGGATCACCCGTCCCAGCCTCTATGCCTGTTTCGGCAATAAGGAAGGCCTGTTCCGGCAAGCGCTCGACCTCTATGAGACCGAGAAGCTCTGCTATGTGAAGACGGCGCTGGAAGCCCCTACGGCGCGCGGCGTGGCCGAGCGGCTGCTGCGCGGTTCGCTCGCCATGCAATGTAGCGATACCGAGCCGCAGGGCTGCCTGGGTGTCATCAGCACGGTCGCCGGCGTAACCGAAGCGGACTGCATCCGCGATGAAGTCCTCAAGCGTCGCGCTTCGTCGAACGCCGCCTTGCTCGCGCGTTTCGTGCAAGCCAAGGAAGAAGGCGACCTGCCCGATGGCGTCGAGCCGGATGCATTATCCTGTTATCTTTCAACCTTGATGCAGGGCATGGCGGTTCAGGCTTCCGGCGGCGCATCGCGCGAAACGCTGGAAAGGCTGGTGCAAACCACCCTTGCCATGTGGCCGGGCCGGTAA
PROTEIN sequence
Length: 203
MEQVATTSRGRPREFDPAQALAAALQVFWRRGYEGASISELTEAMGITRPSLYACFGNKEGLFRQALDLYETEKLCYVKTALEAPTARGVAERLLRGSLAMQCSDTEPQGCLGVISTVAGVTEADCIRDEVLKRRASSNAALLARFVQAKEEGDLPDGVEPDALSCYLSTLMQGMAVQASGGASRETLERLVQTTLAMWPGR*