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scnpilot_cont_500_p_scaffold_5686_6

Organism: SCNPILOT_CONT_500_P_Nitrobacter_63_4.0_partial

partial RP 6 / 55 BSCG 9 / 51 MC: 1 ASCG 5 / 38
Location: comp(3828..5471)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 547.0
  • Bit_score: 919
  • Evalue 5.50e-265
  • rbh
RNA polymerase sigma-54 factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRS3_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 547.0
  • Bit_score: 919
  • Evalue 1.90e-264
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 547.0
  • Bit_score: 919
  • Evalue 2.70e-264

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGGCGCTGACGCAGAGACTCGAATTCCGACAGTCCCAGTCGCTGGTGATGACGCCGCAGCTCATGCAGGCGATCAAGCTGCTGCAACTGTCGAATCTCGACCTTGCCGCATTCGTCGAGAGCGAGCTGGAACGCAACCCGCTGCTGGAGCGCGCCGGCGACGACGGTCCTGATTCAGCGGCGGCGGACTCCGCACCCTCCGAAGCCGCCACCGGCTTTTCAGACAGCGAAGCCGCGGCGTTCGGGGAAGACGCCGCGGGCGATCGTCCCGGCGGCCAGGATTCCGAATCCGCGTCTGAGGAGTGGATGAACCGCGATCTCGGCAGCCGCACCGAGATCGAGCAGACCTTCGACAGCGGCCTCGAAAACGTCTTTCCGGAGGAACCGGCCGAGACCGCGGCGCGGACCGCACAGGATTCCGCACCGACCGCGTTCACCGAATGGGGCGGCGGCGCCTCGAGCGACGACAGCTACAATCTCGAAGCCTTCGTCGCCGCTGAAGTAACGCTTGCCGAATATCTCGCCGAACAGCTCGCGGTCGCGGTCACGGAGCCGGCGCAGCGCATGATCGGACAATATCTGATCGACCTCGTCGACGAAGCCGGTTACCTGCCCCCTGATCTCGGCGAAGCCGGCGACAAGCTCGGTGCCGCCGAACGTGATGTCGCTGCCGTGCTGGCAGTGCTTCAGAGCTTCGATCCGCCCGGGATTTGCGCCCGCAGCCTAAGCGAATGCCTTGCGATCCAGTTGCGCGAAAAGGACCGCTACGATCCGGCGATGCAGGCGCTGATCGAGCATCTCGACGTGCTGGCGAAGCGCGATTTCGCAGCCTTGCGCAGGATCTGCGGCGTCGATGACGAAGACCTTGCCGGGATGATCGGAGAAATTCGTCATCTCGATCCCAAGCCCGGATTGAAATTCGGCGCCACGCGCACGCAGACCGTGGTGCCGGATGTGTACGTCCGGCCCGGCCCCGACGGCGGCTGGCTCGTGGAACTCAACAGCGATACGCTGCCGCGCGTGCTGGTCAACCAGAGCTACTATGCGGAACTGTCGAAGACGATCCGCACGGACGGCGACAGGACCTATTTCACCGATTGCCTGCAGAACGCGACCTGGCTGGTCCGTGCGCTCGATCAACGCGCCCGCACCATTCTCAAGGTCGCGACCGAGATCGTGCGCCAGCAGGACGGCTTTTTCACGCACGGCATCGCACGCCTGAGGCCGCTCAATCTCAAGGCCGTGGCGGATGCGATCCAGATGCACGAGTCCACGGTGTCGCGCGTCACCGCCAACAAATACATGGCGACGAATCGCGGCATCTTCGAGCTGAAGTACTTCTTCACAGCGTCGATCGCCTCAGCCGACGGTGGCGACGCCCATTCGGCGGAGGCCGTCCGTCATCACATCAGGCGGTTGATCGAGGCGGAGGATCCGGCGGCCGTCCTGTCCGACGACACCATCGTGGAACAATTGCGCGAAGCCGGCATCGATATCGCCCGCCGCACCGTCGCGAAATATCGCGAGGCCCTGCGAATTCCATCCTCGGTGCAACGCCGCCGCGACAAGCAGAACCTGCCCGGCAAGCCGGGGACGGCGGCGGCGCCCCCGGCCGATCGTTCCAGCGACGCCACACCGGCTTGA
PROTEIN sequence
Length: 548
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLAAFVESELERNPLLERAGDDGPDSAAADSAPSEAATGFSDSEAAAFGEDAAGDRPGGQDSESASEEWMNRDLGSRTEIEQTFDSGLENVFPEEPAETAARTAQDSAPTAFTEWGGGASSDDSYNLEAFVAAEVTLAEYLAEQLAVAVTEPAQRMIGQYLIDLVDEAGYLPPDLGEAGDKLGAAERDVAAVLAVLQSFDPPGICARSLSECLAIQLREKDRYDPAMQALIEHLDVLAKRDFAALRRICGVDDEDLAGMIGEIRHLDPKPGLKFGATRTQTVVPDVYVRPGPDGGWLVELNSDTLPRVLVNQSYYAELSKTIRTDGDRTYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGIARLRPLNLKAVADAIQMHESTVSRVTANKYMATNRGIFELKYFFTASIASADGGDAHSAEAVRHHIRRLIEAEDPAAVLSDDTIVEQLREAGIDIARRTVAKYREALRIPSSVQRRRDKQNLPGKPGTAAAPPADRSSDATPA*