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bjp_ig2103_scaffold_8166_1

Organism: BJP_Ig2103_Hor_218_2014_Acetobacterium_woodii_44_33_partial

partial RP 31 / 55 MC: 1 BSCG 31 / 51 ASCG 10 / 38 MC: 1
Location: 2..3559

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 999.99
  • Bit_score: 2248
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LBV9_ACEWD similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 999.99
  • Bit_score: 2248
  • Evalue 0.0
  • rbh
rpoC; DNA-directed RNA polymerase beta' subunit RpoC similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 999.99
  • Bit_score: 2248
  • Evalue 0.0
  • rbh

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Taxonomy

Acetobacterium woodii → Acetobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3558
CTGAAACCAGAAAAAGAGGGGTTGTTTTGCGAGAAAATTTTTGGACCGCAGAAAGACTGGGAATGTAACTGTGGTAAGTACAAGCGTATTCGCCATAAAGGCATTGTCTGTGAAAACTGTGGGGTTGAAGTAACTAAGGCTAAGGTTAGACGTGAGCGGATGGGGCATATTGAACTGGCCTCTCCGGTTTCGCATATCTGGTATTTTAAAGGCATCCCCAGTCGAATGGGACTGATCCTGGAAATGTCTCCCAGAAATCTGGAAAAAATTATTTATTTTGCTGCCTATGTGGTCACTGATCCGGGTGAAAGTAATTTTGATTTCAAACAGATCCTCACTGAAGCGGAATATAAAGAAGCCAAGAGTCAGTTTGGCAATAAGTTTACCGCCAGCATTGGTGCCGAAGCGATTCAGGAATTACTGAAACTGGTTGACCTGGATCAGGAATCGGCTGTGCTGAAGGAAGAACTAAAAGGCAGCTCCGGTCAGAAAAAAATCCGGGTCGCCCGTCGTCTGGAAGCGGTTGAAGCGTTTAGAAATTCAACCAACCGTCCGGAATGGATGATTCTGGAAACCATTCCGGTTATTCCGCCGGAATTGCGGCCGATGGTCCAGTTGGATGGGGGTCGTTTTGCGACCTCGGATCTGAATGACCTTTACCGCCGGGTCATTAACCGAAATAACCGGCTGTTAAAACTGCTGGAACTGGATGCTCCGGATATCATTGTTCAAAATGAAAAGCGGATGCTTCAGGAAGCCGTCGATGCCTTAATTGACAATGGTCGCCGCGGTCGGGCTGTCACCGGACCGGGTAACCGTCCCTTTAAATCCCTCAGTGATATGCTTAAGGGTAAACAGGGTCGATTCCGTCAGAACCTTTTGGGGAAACGGGTTGACTACTCGGGCCGTTCGGTTATTGTCGTTGGACCGGATCTGAAAATGTTCCAATGTGGACTCCCTAAAGAAATGGCAATTGAATTATTCAAGCCGTTTGTGATGCGGGAACTGGTTGGCCGTAACCTGTCCCAAAACATTAAAAGTGCAAAAAAAATGGTCGAAAAACTGGATCCGATGGTCTGGGATGTGCTGGAAGATGTTATTCAGGAACATCCAGTGCTGTTAAACCGAGCGCCGACCCTCCATCGCCTGGGTATTCAAGCCTTTGAGCCAATTCTGGTTGAAGGTAAAGCGATCAAACTCCATCCGCTGGTATGTACCGCCTACAATGCCGATTTTGATGGCGATCAGATGGCTGTCCATGTACCCTTATCAGTCGAAGCTCAGGCAGAAGCCCGCTTCCTGATGCTGGCGTCCAATAATATTCTTAAACCGCAAGATGGAACGGCGGTTGTTGCTCCAACCCAGGATATGATCTTAGGTACCTATTACATGACCATCTATAAGAAAGATGGCAAAGGCACAAATAGTGTCTTCCGTGATCTGGACGAAATGGAAATGGCTTACTTCAATAAAGAAGTCGAGCTTCATGCTCAGGTTAAGGTGCGAATTACCAAAGAAATTGATGGCGAAGAAATGACCCGTTTAGTCGATGGGACCGTGGGCCGGTTCATTTTTAATACCATTATTCCTCAGGAACTGGGTTTTGTTAAACGTGACACCATCGAAGAAAAATTTGCCCTGGAAGTTGACCGCCAGGTTAATAAAAAAGTATTGTCGGAAATTGTTGAACGATGCTATAAAACTTATGGTCCCACCAAAACATCCGAAGTATTGGATGAAATTAAACGCTTAGGTTTTAAATTCTCAACCAGAGGTGCGATTACCGTTGGGGTCAGTGATATGGAAGTTCCTAAAAACAAAGAGGAAATTCTATCCCGGGCCGATGACAAGATCACCGAAAATATGAACCTTTATCGTCAAGGTTTTATCAGTGATGATGAACGTTACAACAACGTTGTCGAGATCTGGAACAAAGCCACTGATGAGGTCACCGAGGCGCTGTTAGATCACCTTGAAGATCTGAATCCGATTAACATGATGGCGGATTCCGGGGCCCGAGGTAGTAAGAACCAGATCCGACAGTTAGCCGGGATGCGTGGTCTGATGGCCAACCCAAGTGGTCGCATCATCGAGTTACCAATCCGTTCAAACTTCCGTGAAGGGCTAAACGTATTGGAGTTTTTCTCCTCCACCCATGGGGCCCGAAAAGGTCTGGCGGATACCGCCCTTAGAACCGCCGATTCCGGTTACCTGACCCGACGTCTGGTTGACGTCAGCCAGGATGTGATTGTCCGTGAAGATGATTGCGGCACCACCCGGGGCTATGAAGTTTCGACTATTAATGATCACGGCGAAATTATCGAAACCTTGCATGAACGATTGGTCGGCCGATATGCTTTTGAAGATGTGGTTCATCCGGAAACAGGCGAAGTTCTGGCACCGGCTAATGAGATCATCTCAACTGAAATGGCTGACAGTATTGATAAAGCCGGGATTGAAAAAGTGTTAATTCGCGCCGCCTTCAATTGTCAGTCCAAATATGGGGTCTGTAAGACCTGCTATGGGGTGGATTTAACTACCTGGCGACCGGTTGAAATCGGCGAAGCAGTTGGTATTATTGCCGCCCAGTCGATTGGTGAGCCGGGTACCCAGCTGACCATGCGTACCTTCCATACCGGTGGGGTTGCTTCAGCAGACGATATCACCCAGGGTCTTCCCCGTATCGAAGAGCTTTTCGAAGCTCGAAAACCGAAAGGCCAGGCGATTATTTCAGAAATTGACGGTCGGGTAGAAATTCAAGATACCCAGAAGAAAACGGAAGCAGTTGTTACCGGTGCAGACGGGGATATGAAGGTCTACCTGATTCCTTACGGCTCTCGATTGCGAGTACATACCGGCGATCAGGTCATTGCCGGAGATGAGATCACCGAAGGTTCCATTAACCCCAGTGATATTTTGCGCATTCAGGGGATTGACCATGTTCAGCAATACTTGCTGCAGGAAGTACAAAAAGTTTACCGAATGCAAGGGGTACACATTGGCGACAAGCATTTGGAAGTTATTATCCGTCAAATGCTTAGAAAAGTTAAGATTGAAAACCCTGGTGACACCGCCTTACTGGCCGGCAGCTTAGTCGATATCTTCAATTTCGAAGAAGAAAACCGCGCCGCCCGGGAAAACGGTGGCGAAGAAGCGACAGCCAGCCGGGAACTGCTGGGTATCACCAAAGCATCACTGGCAACTGACTCATTCTTATCAGCCGCATCCTTCCAGGAAACCACCCGGGTTCTTACCGACGCTGCCATCAAAGGCAAGGTTGACCCCCTGATTGGACTTAAAGAAAATGTTATCATCGGACAATTGGTGCCAGCCGGTACCGGTGTCAAGATGTATGGTGACATTGATCTGGTCTATGAACGGGAAGAGGAAGATATTTATGAGGATATGATCGAAGAAGATGTTCTGACCGAATCGTTGGATATTGTTTTTGATGATGATATTTTAAATGCTTATGTTGAAGAAGAACAGGAAGAAACGGAAGACGCTATTATTACCGATCTCGACATTTTCGATCTGGATTTCTTATCAAAAGAATAA
PROTEIN sequence
Length: 1186
LKPEKEGLFCEKIFGPQKDWECNCGKYKRIRHKGIVCENCGVEVTKAKVRRERMGHIELASPVSHIWYFKGIPSRMGLILEMSPRNLEKIIYFAAYVVTDPGESNFDFKQILTEAEYKEAKSQFGNKFTASIGAEAIQELLKLVDLDQESAVLKEELKGSSGQKKIRVARRLEAVEAFRNSTNRPEWMILETIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLLKLLELDAPDIIVQNEKRMLQEAVDALIDNGRRGRAVTGPGNRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKMFQCGLPKEMAIELFKPFVMRELVGRNLSQNIKSAKKMVEKLDPMVWDVLEDVIQEHPVLLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLASNNILKPQDGTAVVAPTQDMILGTYYMTIYKKDGKGTNSVFRDLDEMEMAYFNKEVELHAQVKVRITKEIDGEEMTRLVDGTVGRFIFNTIIPQELGFVKRDTIEEKFALEVDRQVNKKVLSEIVERCYKTYGPTKTSEVLDEIKRLGFKFSTRGAITVGVSDMEVPKNKEEILSRADDKITENMNLYRQGFISDDERYNNVVEIWNKATDEVTEALLDHLEDLNPINMMADSGARGSKNQIRQLAGMRGLMANPSGRIIELPIRSNFREGLNVLEFFSSTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTTRGYEVSTINDHGEIIETLHERLVGRYAFEDVVHPETGEVLAPANEIISTEMADSIDKAGIEKVLIRAAFNCQSKYGVCKTCYGVDLTTWRPVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIEELFEARKPKGQAIISEIDGRVEIQDTQKKTEAVVTGADGDMKVYLIPYGSRLRVHTGDQVIAGDEITEGSINPSDILRIQGIDHVQQYLLQEVQKVYRMQGVHIGDKHLEVIIRQMLRKVKIENPGDTALLAGSLVDIFNFEEENRAARENGGEEATASRELLGITKASLATDSFLSAASFQETTRVLTDAAIKGKVDPLIGLKENVIIGQLVPAGTGVKMYGDIDLVYEREEEDIYEDMIEEDVLTESLDIVFDDDILNAYVEEEQEETEDAIITDLDIFDLDFLSKE*