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gwf1_scaffold_219_34

Organism: GWF1 Unbinned

megabin RP 50 / 55 MC: 49 BSCG 51 / 51 MC: 50 ASCG 30 / 38 MC: 19
Location: comp(36578..37390)

Top 3 Functional Annotations

Value Algorithm Source
collagen-binding collagen-like cell surface-anchored protein FneC Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 267.0
  • Bit_score: 96
  • Evalue 8.40e-17
collagen triple helix repeat-containing protein KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 113.0
  • Bit_score: 85
  • Evalue 3.00e-14
Collagen triple helix repeat protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 84
  • Evalue 3.00e+00

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Taxonomy

R_OD1_Uhrbacteria_51_9 → Uhrbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCACTCATCGTCGACGTCCCCGCTGGCCTTCGCTGCTGCGATCTTCGCTGCGATCTTCACGGCCTCATGTGCCCTTCCCGAAGGGGACAGGGGCGACCCAGGGAAGCCGGGGCTGATGGGCAGCGCCGGTGATGTCGGCAAAACCGGCGTGCGGGGAGCGCAAGGGGAGAAGGGAGAGCCGGGAGACCCCGGGCCGGCCGGGCCGGCCGGGGCGACCTGCAGCGCCGACGACGTGGCGCAGCTGCTGGCGTCCAGCCCGCAGTTCAGGGCTCAGCTGGTCGAGATGCTCGTCGCTGGCCACGGCGAAGCGCTGAGGGGGCCGCAGGGGGAGCGGGGGGCGGTCGGCGAGAGCGGGCTGCAGGGGGAGCCGGGAGAGCGGGGGGAGCAGGGGGCGGCAGGGATGAGCGCCCAGCAGCTCTACGCCTTCAACGGCCATGGCGATGCGATTGGGTGGGTCACGAGTGTAGATGATAGTGGATATATTATTTATATTGAACAAGATGATGTTTTCTACAGAATACCAACAGGACTCGGCGGTTGGGGAGTAAGAAACGTTCGAATCTATTATGATTCGTTGAATTGCACCGGAACGCCATACATCAATGAGCCTCCAAGAAGACTGACCAACGTAGATGGGTCTGGATTCTATAGAACAACGAATGTCGGCTGGCAAGTGATGATCCCGCAATCCACCTTATCACCAGATGGGATATGTGGTCCAGGAAGCGGCGGAATGGAGATATATGTAACCATGGCGGAACAGGTGCAGAGACCAGATTATTTGATCGGTCCGTTCACGATCGGACGATGA
PROTEIN sequence
Length: 271
MHSSSTSPLAFAAAIFAAIFTASCALPEGDRGDPGKPGLMGSAGDVGKTGVRGAQGEKGEPGDPGPAGPAGATCSADDVAQLLASSPQFRAQLVEMLVAGHGEALRGPQGERGAVGESGLQGEPGERGEQGAAGMSAQQLYAFNGHGDAIGWVTSVDDSGYIIYIEQDDVFYRIPTGLGGWGVRNVRIYYDSLNCTGTPYINEPPRRLTNVDGSGFYRTTNVGWQVMIPQSTLSPDGICGPGSGGMEIYVTMAEQVQRPDYLIGPFTIGR*