ggKbase home page

gwf1_scaffold_2922_7

Organism: GWF1_OD1_35_5

partial RP 40 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 8002..9423

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKP68622.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 905
  • Evalue 3.50e-260
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 368.0
  • Bit_score: 401
  • Evalue 3.30e-109
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 400
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_OD1_ACD7_35_17 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGTTACAATCAAAAAAAGGAACAATAAAAAAATAACTGCCAATAAAAAAGGGATTGCCAAAAAATCTCCCAAGAGAAACGTTGCGCCAAAATCGAAAAATAAAAAGGCGATCAAGAAAAATGTTAAAAAGAGTTTTAAAAAGATAGTTAAAAAGAAGAATATTGCAAAAAATATTAAGAAAACTGTGAAAAAAGATAAAAAAATAATTAAGAAAAAATTGAAAAAAATAAATAAAAAGATGGTCAAAGCAACGCCGAAAAAATCAGTCAAAAAATCGGCGGTATTAAATAAAGGCAAGAAGGCGCTTAAGCCCAAAGAAAAAATAAATAATGTCATAGATGATTTAGTTTCTCGTGGAAAGCAACGGGGCTTTATAACAGAAGATGAGATTATTCATACTTTTCCAGATATGGAAAAGAATATTGAAGAATTAGAGGAGCTTTATAGCAAGCTGGAAACGGGCGGAGTGAGAATAATGAGTTCAGGCGAAGTAATTAAAAACGAAACGGACAAAATTGCGGAAGATTTTGTGGTTGAGAAAAATAAAGCCGGTAAAAAGAAAAAGAAAACCGTGGAAGAATCGGAGCCTAATTATAATGATTCAGTTCAGATGTATTTGCGGGAGATTGGCAAGGTTCCTCTTTTGAAATCTGATGACGAGGTTCGGTTGGCGAAATTAATTGAAAAAGGAGAGATTTCCGCCAAGCAAAAATTAACCGAAGCTAACCTTCGTTTAGTGGTGAGTATCGCCAAAAAATACGTGGGCAGATCTAATAATTTGTCTTTATTAGATTTGATTCAAGAAGGAAATATCGGACTATTTAAAGCAGTAGAGAAATTCGATTATCATAAGGGTTATAAATTTTCCACTTATGCAACGTGGTGGATTCGTCAAGCGATTACTCGAGCCCTAGCTGATCAATCCAGAACGATTCGTATCCCCGTGCATATGGTAGAAACTATCAATAAATACACACAGATAGTGAGACAATTAGTCCAAGAATTGGGCCGAGAGCCTTTGGCAGAGGAAATTGCTGCTGAAATGGATATGGAAGTGGACAAGATTAGGCACATTCAAAAAATTTCCCAAGAAACTGTTTCTTTGGAGACTTCTATCGGAGATAGTGATGATGATAGTGTGTTGGGTGATTTTATCGAAGACACAGAAACTATTATGCCCGACCAAACCGCTTCTCGGACACTTCTGAAAAGCCACGTGATTGAAATACTAGAAGAATTAAGTCCACGCGAACAAAGGATTTTAAAAATTCGTTTTGGTTTGGATGATGGCGTAACTCATACTTTGGAAGAAGTGGGGCAAGAGTTTGGCGTAACCCGAGAACGCATCCGACAAATTGAAGCTAAAGCCTTGGACAAAATAAGAAATCAAAAAGGCCTTGGAAAATTAAGAGATTATTAA
PROTEIN sequence
Length: 474
MVTIKKRNNKKITANKKGIAKKSPKRNVAPKSKNKKAIKKNVKKSFKKIVKKKNIAKNIKKTVKKDKKIIKKKLKKINKKMVKATPKKSVKKSAVLNKGKKALKPKEKINNVIDDLVSRGKQRGFITEDEIIHTFPDMEKNIEELEELYSKLETGGVRIMSSGEVIKNETDKIAEDFVVEKNKAGKKKKKTVEESEPNYNDSVQMYLREIGKVPLLKSDDEVRLAKLIEKGEISAKQKLTEANLRLVVSIAKKYVGRSNNLSLLDLIQEGNIGLFKAVEKFDYHKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKYTQIVRQLVQELGREPLAEEIAAEMDMEVDKIRHIQKISQETVSLETSIGDSDDDSVLGDFIEDTETIMPDQTASRTLLKSHVIEILEELSPREQRILKIRFGLDDGVTHTLEEVGQEFGVTRERIRQIEAKALDKIRNQKGLGKLRDY*